Pairwise Alignments

Query, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 504 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  198 bits (503), Expect = 5e-55
 Identities = 159/521 (30%), Positives = 239/521 (45%), Gaps = 36/521 (6%)

Query: 4   IALKPLLLAAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQ 63
           +A   +LLA  L++   LAQAA  L          FDP +     D +     VF+ L +
Sbjct: 8   VAAAGVLLALSLVS--ELAQAAGILTIGRREDSTTFDPIKSAQNAD-NWVFSNVFDVLIR 64

Query: 64  FKRGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLL 123
             + GT +EPGLA  W +S DG  YTF LR+         FS      A D +F+ +R+ 
Sbjct: 65  VDKTGTTLEPGLAQHWTVSPDGKVYTFTLREAR-------FSDGSPVTAQDAVFSLSRIR 117

Query: 124 DA-QSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASV 182
           D+ +S +R +Y             + I ++   D HT+   L +  A F+  LA+  ASV
Sbjct: 118 DSKESLWRDSY-------------SIIDTLAAPDAHTLVVTLKSPSAPFLSQLALPNASV 164

Query: 183 QSAEYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVF 242
                  +L ++  AE    KPVG+G FV + + +  +I    N  YW+ + V LD + +
Sbjct: 165 LPENIVHRLGEETFAE----KPVGSGAFVIQSWARGDKIVLTKNPYYWQADHVSLDGVEW 220

Query: 243 AITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHPPL 302
              PD  +R+ K++AGE   +     + +  +++DPNL V Q        L  N  H  L
Sbjct: 221 QTIPDDNTRMLKVQAGELDAALSVPFSRLASLQKDPNLKVTQDPSTREDHLLINHAHGLL 280

Query: 303 DQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAKALLK 362
            +++VRQALD AIDK AI+K V  + G +A + LP     +       PYDP KAK +LK
Sbjct: 281 GKVEVRQALDYAIDKSAIVKTVTFNYGTVANSYLPKGALYFYADNLQRPYDPEKAKQMLK 340

Query: 363 EAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAKNG 422
            AG A G T+N     V  A +      A ++QQ   K G+  N+   +  +       G
Sbjct: 341 AAG-ASGLTLNY----VVNAGDEVDEQIAVLLQQQLAKAGVAVNLQKVDPSQNWSMLVAG 395

Query: 423 EHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNY-AKWCNPAYDKLVQQAKVSNDREQRI 481
           + D  +  WT D  DPD      +        NY  ++ N     LV  A+V  D ++R 
Sbjct: 396 DFDLSVNYWTNDILDPDQ--KTTFVLGHDSNMNYMTRYQNDKVKALVAAARVEMDPKKRE 453

Query: 482 KWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFG 522
           + Y   QK+ K+ V    +  S      RK +  F  +P G
Sbjct: 454 QMYIDLQKMAKDDVNWIDLYYSPYRNVTRKNISGFYQNPLG 494