Pairwise Alignments

Query, 542 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  922 bits (2384), Expect = 0.0
 Identities = 437/539 (81%), Positives = 489/539 (90%)

Query: 1   MLKHAVIPLIVSAGLMAAAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETMFNR 60
           MLKHAVIP ++ AGL++ AP A AA+NLVFCSEGSPAGFDPGQYTTGTDFDASAET+FNR
Sbjct: 1   MLKHAVIPFLLGAGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNR 60

Query: 61  LTQFERGGTAVIPGLATSWDVSPDGLTYTFHLRDGVKFHTTSYFKPTRTFNADDVLFTFN 120
           LTQFERGGTAVIPGLAT W+VS DG TYTFHLR+GVKFHTT YFKP+R FNADDVLFTFN
Sbjct: 61  LTQFERGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFN 120

Query: 121 RMINKDDPFRKAYPTEFPYFTDMGMDTNIKNIEKVDEHTVKFTLGTVDAAFIQNLAMSFA 180
           RM++KD+PFRKAYPTEFPYFTDMGMD NI  +EK+DEHTVKFTL  VDAAFIQNLAMSFA
Sbjct: 121 RMLDKDNPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFA 180

Query: 181 SIQSAEYAAQLLKEGKPADINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKIDNL 240
           SIQSAEYA QLLK GK ADINQKPIGTGPFVF  YQKD+ IR+ GNKDYW+PEDVKIDNL
Sbjct: 181 SIQSAEYADQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNL 240

Query: 241 IFAITTDPSVRIQKLKKNECQITLFPRPADLKALGDDKDLKLPHQAGFNLGYIAYNVMDK 300
           IFAITTD SVR+QKLKKNECQ+TLFPRPAD++ L  DK+L++P QAGFNLGYIAYNVMDK
Sbjct: 241 IFAITTDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDK 300

Query: 301 VKGSDQPNPLADLRVRQALDMSVNKQQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDAKY 360
           +KGS++ NP+A L+VRQALDM+V+K++II+SVYQGAGQLAVNAMPPTQWSYD +IKDA +
Sbjct: 301 IKGSNEANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAF 360

Query: 361 DPEKAKSLLKEAGIKEGTEIVLWAMPVQRPYNPNAKLMAEMLQNDWKKIGLNVKITSYEW 420
           DPEKAK LLKEAGIKEGTEI LWAMPVQRPYNPNAKLMAEMLQ+DW KIG+  KI SYEW
Sbjct: 361 DPEKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEW 420

Query: 421 GEYIKRSKGGENQAMIIGWSGDNGDPDNWLNVLFGCDSLSGNNFSKWCDKKFDGIVKEAK 480
           GEYIKRSKGGE  AM+IGWSGDNGDPDNWL  L+GCD++ GNNFSKWC K +D ++K+AK
Sbjct: 421 GEYIKRSKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAVDGNNFSKWCYKPYDDLIKQAK 480

Query: 481 ATSDVAKRTELYKQAQHILKDAVPMTPIAHSTVYQPMRSTVQDFKISPFGLNSFYGVSV 539
           ATSD AKRTELY++AQHILK+ VP+TPIAHSTVYQPM + V+DFKISPF LNSFYGVSV
Sbjct: 481 ATSDQAKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSV 539