Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  726 bits (1874), Expect = 0.0
 Identities = 346/533 (64%), Positives = 417/533 (78%), Gaps = 3/533 (0%)

Query: 1   MRHTTVLSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDA-AEPLY 59
           M    +   + A  LLA   +  AA   +LV+CSE SPAGFD +QYT+ TD DA AE ++
Sbjct: 1   MERIALKPLLLAAGLLACMPLAQAAS--TLVYCSEASPAGFDPSQYTSGTDFDASAETVF 58

Query: 60  NRLVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFT 119
           NRL +F++G T V P LAT WDIS DG+TYTFHLR+GVKFH+   F PTRDFNADDVLFT
Sbjct: 59  NRLTQFKRGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFT 118

Query: 120 FNRMLDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMS 179
           FNR+LD   PFR+AYP+E PYF  M LN  I  V+K D HTV   LN VDA+F+QN+AMS
Sbjct: 119 FNRLLDAQSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMS 178

Query: 180 FAAILSAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLD 239
           FA++ SAEYA QLLK GK  +INQKP+GTGPFVF+RYQKDSQIRYVANKQYW P  VKLD
Sbjct: 179 FASVQSAEYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLD 238

Query: 240 QLIFAINTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVR 299
            L+FAI  DA+ R+QKLKAGECQV+ +PRPAD++ +K DPNL +L + GFNLG++AYNV 
Sbjct: 239 NLVFAITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVT 298

Query: 300 HKPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAK 359
           H P DQL+VRQALDMA++K +I+ AVYQ AGQLA NA+PP QWSYD +IKDA Y+P KAK
Sbjct: 299 HPPLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAK 358

Query: 360 ELLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKR 419
            LLK AGV  GT + LWAM VQR  NPNA++ A+M+Q DW K+G+K  IVSYEWGEYIKR
Sbjct: 359 ALLKEAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKR 418

Query: 420 TKNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAIGGNNYSMWCDPAYDKLIKQAKVVTDRE 479
            KNGEHD  + GWTGDNGDPDNWLG LYSC A+ G+NY+ WC+PAYDKL++QAKV  DRE
Sbjct: 419 AKNGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNYAKWCNPAYDKLVQQAKVSNDRE 478

Query: 480 QRTVLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGVSI 532
           QR   Y+QAQ++LK+QVPITP+A+STV QPL  +V+ FK+SPFG   F GVS+
Sbjct: 479 QRIKWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFGLTPFYGVSL 531