Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 542 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  751 bits (1938), Expect = 0.0
 Identities = 362/537 (67%), Positives = 422/537 (78%), Gaps = 11/537 (2%)

Query: 6   VLSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDA-AEPLYNRLVE 64
           V+  + +  L+A A    AA   +LVFCSEGSPAGFD  QYTT TD DA AE ++NRL +
Sbjct: 6   VIPLIVSAGLMAAAPFAQAAT--NLVFCSEGSPAGFDPGQYTTGTDFDASAETMFNRLTQ 63

Query: 65  FEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRML 124
           FE+G T V+P LAT WD+SPDG+TYTFHLR+GVKFH+   FKPTR FNADDVLFTFNRM+
Sbjct: 64  FERGGTAVIPGLATSWDVSPDGLTYTFHLRDGVKFHTTSYFKPTRTFNADDVLFTFNRMI 123

Query: 125 DPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAIL 184
           + D PFRKAYPTEFPYF  M ++ NI  +EK D HTV  TL TVDAAFIQN+AMSFA+I 
Sbjct: 124 NKDDPFRKAYPTEFPYFTDMGMDTNIKNIEKVDEHTVKFTLGTVDAAFIQNLAMSFASIQ 183

Query: 185 SAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLIFA 244
           SAEYA QLLK GKP+DINQKPIGTGPFVF+ YQKDS IRY  NK YW P  VK+D LIFA
Sbjct: 184 SAEYAAQLLKEGKPADINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKIDNLIFA 243

Query: 245 INTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRHK--- 301
           I TD SVR+QKLK  ECQ+TL PRPAD+ AL  D +LKL  + GFNLGYIAYNV  K   
Sbjct: 244 ITTDPSVRIQKLKKNECQITLFPRPADLKALGDDKDLKLPHQAGFNLGYIAYNVMDKVKG 303

Query: 302 -----PFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPE 356
                P   L VRQALDM+VNKQ I+++VYQGAGQLAVNAMPPTQWSYD +IKDA Y+PE
Sbjct: 304 SDQPNPLADLRVRQALDMSVNKQQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDAKYDPE 363

Query: 357 KAKELLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEY 416
           KAK LLK AG+KEGTEI LWAMPVQRPYNPNAKLMAEMLQ+DW KIGL VKI SYEWGEY
Sbjct: 364 KAKSLLKEAGIKEGTEIVLWAMPVQRPYNPNAKLMAEMLQNDWKKIGLNVKITSYEWGEY 423

Query: 417 IKRTKNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAIGGNNYSMWCDPAYDKLIKQAKVVT 476
           IKR+K GE+   +IGW+GDNGDPDNWL  L+ CD++ GNN+S WCD  +D ++K+AK  +
Sbjct: 424 IKRSKGGENQAMIIGWSGDNGDPDNWLNVLFGCDSLSGNNFSKWCDKKFDGIVKEAKATS 483

Query: 477 DREQRTVLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGVSIT 533
           D  +RT LYKQAQ +LK  VP+TP+AHSTV QP+ + V+ FK+SPFG N F GVS++
Sbjct: 484 DVAKRTELYKQAQHILKDAVPMTPIAHSTVYQPMRSTVQDFKISPFGLNSFYGVSVS 540