Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 532 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  471 bits (1213), Expect = e-137
 Identities = 248/530 (46%), Positives = 333/530 (62%), Gaps = 8/530 (1%)

Query: 7   LSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDAA-EPLYNRLVEF 65
           L A  A +LL+VA        + LV C+E SP GFD   YTTA   DAA E ++NRLV+F
Sbjct: 6   LQAAMAAALLSVAI---GVSAKPLVVCTEASPEGFDPVLYTTAVTADAAAETMFNRLVDF 62

Query: 66  EKGETGVVPALATKW-DISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRML 124
           + G T VVPALA    +IS DG+TYTFHLR+ +KFH+   FKPTR+ NADDVL++F R L
Sbjct: 63  KPGTTEVVPALAKDLPEISADGLTYTFHLRDDIKFHTTDYFKPTRNMNADDVLWSFQRQL 122

Query: 125 DPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAIL 184
           DP+HP+ K     +PYF  M   + +  VEKTD HTVV TL   +A F+ ++ M+F++I 
Sbjct: 123 DPNHPWHKKSLVGYPYFESMGFKELLKSVEKTDDHTVVFTLTRPEAPFLADLGMAFSSIH 182

Query: 185 SAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLIFA 244
           S EYA+QLLK+GK  D+N KPIGTGPFVF RYQKD+Q R+ AN  Y+   +  +D LI A
Sbjct: 183 SKEYADQLLKSGKTEDLNAKPIGTGPFVFTRYQKDAQARFKANPDYF-RGKPAVDPLILA 241

Query: 245 INTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRHKPFD 304
           I+TD +VR+QKLKA ECQ+ L P+P D+ ++K DPNLK+         Y A N  HK   
Sbjct: 242 ISTDNNVRLQKLKANECQIALFPKPDDIPSIKKDPNLKVDELAAMTTSYTALNTTHKYMS 301

Query: 305 QLEVRQALDMAVNKQSILNAVY-QGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAKELLK 363
              VR A+++A +K     A++ +G   +     PPT   +++ +K+   + +KA+ LLK
Sbjct: 302 DARVRHAINIAFDKAGYTEALFGKGNAVVGTGPYPPTLLGFNEKLKNPPRDLDKARALLK 361

Query: 364 AAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRTKNG 423
            AGV EGTE TL+      P NPN  L A+ +Q+D A+IGLKV I   EWGE +KR KNG
Sbjct: 362 EAGVPEGTEFTLFTRNGGGPTNPNPMLGAQRMQADLAQIGLKVNIKVMEWGEMLKRAKNG 421

Query: 424 EHDVSLIGWTGDNGDPDNWLGTLYSCDAI-GGNNYSMWCDPAYDKLIKQAKVVTDREQRT 482
           EHD+   GW GDNGDPDN+L    SCDA   G NY+ WC+  +  LI +A+ + +  QR 
Sbjct: 422 EHDMVSAGWVGDNGDPDNFLTPNLSCDAAKNGENYARWCNKEFQDLIDKARAIAEPAQRA 481

Query: 483 VLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGVSI 532
            LY+QAQ +  +  P  P+A+  +   +   VEGF  SP G N F+   +
Sbjct: 482 ALYEQAQDVFDKDQPWLPMAYPKLFTAMRKNVEGFTQSPLGTNNFATTQV 531