Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 530 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  462 bits (1190), Expect = e-134
 Identities = 235/521 (45%), Positives = 328/521 (62%), Gaps = 5/521 (0%)

Query: 16  LAVATMGHAADKRSLVFCSEGSPAGFDTAQYTT-ATDNDAAEPLYNRLVEFEKGETGVVP 74
           L +A +  AA   S+  C+E SP GFD  QY +  T N +A+ L NRLV+++     +VP
Sbjct: 13  LFIAPLASAASNLSV--CTEASPEGFDVVQYNSLTTTNASADVLMNRLVDYDAASGKLVP 70

Query: 75  ALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRMLDPDHPFRKAY 134
           +LA  W++SPDG+TYTF L   VKFH  + F P+R   A+DV F+F RMLDP +P+ K  
Sbjct: 71  SLADSWEVSPDGLTYTFKLHPDVKFHRTEYFTPSRTLTAEDVRFSFERMLDPANPWHKIA 130

Query: 135 PTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAILSAEYAEQLLK 194
            + FP+   + L   + K++  DP TV  TL+  D+ F+  ++M FA+I  AEYAE+LLK
Sbjct: 131 QSGFPHAQSLQLPTLVKKIDALDPLTVRFTLDHADSTFLAALSMGFASIYPAEYAEKLLK 190

Query: 195 AGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLIFAINTDASVRVQ 254
           AG P  +N +PIGTGPF+F R+QKD+ +RY AN  Y+   +  +D LIFAI  DA+VR+Q
Sbjct: 191 AGTPEKLNSQPIGTGPFIFSRFQKDAVVRYKANPNYF-AGKPPVDNLIFAITPDANVRLQ 249

Query: 255 KLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRHKPFDQLEVRQALDM 314
           KL   ECQ+ L P+P DV   + DP LK+     F   ++A N +H P D+ EVRQA+++
Sbjct: 250 KLHRDECQIALSPKPLDVGEAEKDPALKVEKTAAFMTAFLAINSQHPPLDKPEVRQAINL 309

Query: 315 AVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAKELLKAAGVKEGTEIT 374
           A +K S L AV++G  + A    PP  WSY   +     +  KAK LL  AG+K+G + T
Sbjct: 310 AFDKGSYLKAVFEGTAEAANGPYPPNTWSYAKDLPGYPQDLAKAKALLDRAGLKDGFKTT 369

Query: 375 LWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRTKNGEHDVSLIGWTG 434
           +W  P     NPN  L A++LQ+D AK+G++ +I   EWGE I+R K GEHD+  +GW G
Sbjct: 370 IWTRPTGSLLNPNPNLGAQLLQADLAKVGIQAEIRVIEWGELIRRAKAGEHDLLFMGWAG 429

Query: 435 DNGDPDNWLGTLYSCDAI-GGNNYSMWCDPAYDKLIKQAKVVTDREQRTVLYKQAQQLLK 493
           DNGDPDN+L   +SC A+  G N++ +CDPA DKLI   K  +++  R+ LY+QAQ  ++
Sbjct: 430 DNGDPDNFLTPQFSCAAVKSGTNFARYCDPALDKLISAGKTTSEQGVRSKLYQQAQAQIQ 489

Query: 494 QQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGVSITP 534
           QQ    P+AH T        VEG++VSPFGR  FS VS+ P
Sbjct: 490 QQALWLPLAHPTAFALARKNVEGYQVSPFGRQDFSKVSVKP 530