Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 543 a.a., Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  532 bits (1371), Expect = e-155
 Identities = 262/535 (48%), Positives = 355/535 (66%), Gaps = 5/535 (0%)

Query: 2   RHTTVLSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDAAEPLYNR 61
           R +  L+ +  T++ A+     A   ++LV+CSEGSP  F     TT T  D    +YN 
Sbjct: 9   RRSRSLALLAPTAIAALTLACGAVSAKTLVYCSEGSPENFYPGMNTTGTSFDVTTQVYNT 68

Query: 62  LVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHS-NKEFKPTRDFNADDVLFTF 120
           +VEFE+G T VVP LA KWDIS DG  YTFHLR+GVK+H+ +K FKPTRDFNADD +F  
Sbjct: 69  IVEFERGGTKVVPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFNADDFIFML 128

Query: 121 NRMLDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSF 180
            R      PF K       YFN M + K +  V++ D +TV + LN  +A F+ N+AM +
Sbjct: 129 ERQWKESDPFFKVTSQNHSYFNDMGMPKLLKTVDRIDDYTVKIVLNQPEAPFLANLAMQY 188

Query: 181 AAILSAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQ 240
           A I S EYA  +LKAG P  ++Q PIGTGPF   +YQKD+ IR+ A  QYW   + K+D 
Sbjct: 189 AGIQSKEYAIAMLKAGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQYWG-GKAKIDD 247

Query: 241 LIFAINTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRH 300
           L+FAI  DASVR  KL+ GEC V  +P PAD+DA++ DPN+++L +PG N+GY++YN   
Sbjct: 248 LVFAITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGYLSYNTTK 307

Query: 301 KPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAKE 360
           KPFD + VR+A++MA+NK++I++ VY   G  A N +PPT WSY+D++KD  Y+PE AK+
Sbjct: 308 KPFDDVRVRKAINMAINKKAIIDGVYLTTGVAAKNPIPPTMWSYNDAVKDDPYDPEAAKK 367

Query: 361 LLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRT 420
           LL  AG  +G    LWAMPVQRPYNPNAK +AE++Q+D AKI +K +I S+EWGEY KR 
Sbjct: 368 LLAQAGYPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKSFEWGEYRKRL 427

Query: 421 KNGEHDVSLIGWTGDNGDPDNWLGTLYSC---DAIGGNNYSMWCDPAYDKLIKQAKVVTD 477
           + GEH + ++GWTGDNGDPDN+L TL  C    +  G+N S +C   Y+ L+ +AK    
Sbjct: 428 QAGEHQMGMLGWTGDNGDPDNFLYTLLGCASAKSASGSNISKFCYQPYEDLVVKAKSTVK 487

Query: 478 REQRTVLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGVSI 532
           +  R  LYK+AQ + K+Q P   +AH+   +P+  +V  FK+SPFGR+ F GV I
Sbjct: 488 QADRDALYKKAQVIFKEQAPWFTIAHAVQLKPVRKEVVDFKLSPFGRHTFYGVDI 542