Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  859 bits (2219), Expect = 0.0
 Identities = 412/532 (77%), Positives = 465/532 (87%), Gaps = 3/532 (0%)

Query: 1   MRHTTVLSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDAAEPLYN 60
           MRH T LSA+ A  L++ + +  A    +LVFCSEGSPAGFDTAQYT+ATDNDAAEP+YN
Sbjct: 1   MRHVTCLSALLALGLVSQSPVLLA---NNLVFCSEGSPAGFDTAQYTSATDNDAAEPIYN 57

Query: 61  RLVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTF 120
           RLVEFE+G T V PALAT W++S +G+ YTFHLREGV+FHSNK F P+R FNADDVLFTF
Sbjct: 58  RLVEFERGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTF 117

Query: 121 NRMLDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSF 180
           NRMLD  H FR+AYPTEFPYFNGM L+KNIA+VEKTDP TVV TLNTVDAAFIQN+AMSF
Sbjct: 118 NRMLDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSF 177

Query: 181 AAILSAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQ 240
           A+ILSAEYAEQLL +G+PSDINQ+PIGTGPFVFQRYQKDSQIRY  NK YW  + VK+D 
Sbjct: 178 ASILSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDN 237

Query: 241 LIFAINTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRH 300
           L+F+INTD SVR+QKL+  ECQVTLHPRPAD+ ALKAD  L++L +PGFNLGYIAYN +H
Sbjct: 238 LVFSINTDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQH 297

Query: 301 KPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAKE 360
            PFD+LEVRQA+DMAVNK++IL AVYQ AGQ AVNAMPPTQWSYDDSIKDA Y PEKA++
Sbjct: 298 PPFDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQ 357

Query: 361 LLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRT 420
           L++ AGVK GTEITLWAMPVQRPYNPNAKLMAEMLQ+DW+K+G KV+IVSYEWGEY+KR 
Sbjct: 358 LIQQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRM 417

Query: 421 KNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAIGGNNYSMWCDPAYDKLIKQAKVVTDREQ 480
           KNGEHD++LIGWTGDNGDPDNWLGTLYSCDAIG NNYS WCDP YD L+KQAK VTDR Q
Sbjct: 418 KNGEHDIALIGWTGDNGDPDNWLGTLYSCDAIGSNNYSQWCDPQYDSLVKQAKQVTDRTQ 477

Query: 481 RTVLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGVSI 532
           RT LY+QAQQ LKQQVPITPVAHS V+QPLS KV  FKVSPFGRN FSGVS+
Sbjct: 478 RTALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSV 529