Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  478 bits (1230), Expect = e-139
 Identities = 238/508 (46%), Positives = 336/508 (66%), Gaps = 4/508 (0%)

Query: 28  RSLVFCSEGSPAGFDTAQYTTATDNDA-AEPLYNRLVEFEKGETGVVPALATKWDISPDG 86
           + LV C+E SP GFD  QYTTA   DA AE ++NRLV+F+ G T + PALA +WDIS DG
Sbjct: 37  KPLVVCTEASPEGFDIVQYTTAVTADASAETVFNRLVDFKPGTTEIQPALAERWDISADG 96

Query: 87  MTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRMLDPDHPFRKAYPTEFPYFNGMSL 146
           +TYTFHLR+GVKFH+   FKPTRD NADDVL++ NR LDP+HP+       +PYF  M  
Sbjct: 97  LTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQLDPNHPWHDKTSVGYPYFESMGF 156

Query: 147 NKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAILSAEYAEQLLKAGKPSDINQKPI 206
            + +  V K D HTVV+TL+  +A F++++AM F +I SAEY +QLLK+GK +++N KPI
Sbjct: 157 KELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSIYSAEYGDQLLKSGKTAELNSKPI 216

Query: 207 GTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLIFAINTDASVRVQKLKAGECQVTLH 266
           GTGPF+FQRY KD+Q+R+  N  Y+   +   D L+FAI  D++VR+QKL+A ECQV L+
Sbjct: 217 GTGPFIFQRYNKDAQVRFKPNPDYF-RGKPPADALVFAIAIDSNVRLQKLRANECQVALY 275

Query: 267 PRPADVDALKADPNLKLLTKPGFNLGYIAYNVRHKPFDQLEVRQALDMAVNKQSILNAVY 326
           P+P DV ++K DP LK+        GYIA N +HK  + + VR+A++MA ++Q+ ++ ++
Sbjct: 276 PKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLNDVRVRKAINMAFDRQTHVDQLF 335

Query: 327 -QGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAKELLKAAGVKEGTEITLWAMPVQRPYN 385
            +G   + VN  PPT   Y+   ++   + +KA+ LL  AGV EGT ITL+      P N
Sbjct: 336 GKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLSQAGVPEGTVITLFTRNGGGPTN 395

Query: 386 PNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRTKNGEHDVSLIGWTGDNGDPDNWLGT 445
           PN +L AEMLQ+D  +IGLK+ I   EW E ++R KNGE D+   GW GDNGDPDN+L  
Sbjct: 396 PNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNGEADLVSTGWAGDNGDPDNFLSP 455

Query: 446 LYSCDAI-GGNNYSMWCDPAYDKLIKQAKVVTDREQRTVLYKQAQQLLKQQVPITPVAHS 504
           L SCDA+  G NY+ WC+P + +LI +A+ V D ++R  LY +A ++   + P   +AH 
Sbjct: 456 LLSCDAVKSGENYARWCNPKFQELISRAREVIDNDERARLYNEALKVYDDEQPWISMAHP 515

Query: 505 TVNQPLSAKVEGFKVSPFGRNVFSGVSI 532
            +   +   VEG+ ++P   N F+   +
Sbjct: 516 KMFTAMRDNVEGYVINPLTNNNFATTKV 543