Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 531 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  550 bits (1417), Expect = e-161
 Identities = 259/514 (50%), Positives = 356/514 (69%), Gaps = 3/514 (0%)

Query: 16  LAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDA-AEPLYNRLVEFEKGETGVVP 74
           LA  T+      ++LV+CSEGSP  F+   YT+ T  DA A P+YNRLV+F+ G T +VP
Sbjct: 12  LAALTVSSTVAAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPVYNRLVDFKPGTTELVP 71

Query: 75  ALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRMLDPDHPFRKAY 134
           +LA +W++S DG  YTFHLR+GVKF SNK F PTRDFNADDV+F+F R  D +HP+    
Sbjct: 72  SLAERWEVSDDGKVYTFHLRKGVKFQSNKSFTPTRDFNADDVIFSFMRQKDVNHPYHNVS 131

Query: 135 PTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAILSAEYAEQLLK 194
              +  F  +     I  ++K D HTV  TL   +A F+ ++A  FA+ILSAEYA+ +LK
Sbjct: 132 NGSYSNFESLEFGSLITGIDKVDDHTVRFTLAHPEAPFVADLAWYFASILSAEYADAMLK 191

Query: 195 AGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLIFAINTDASVRVQ 254
           AG P  ++ +PIGTGPF   +YQKDS+I + A   YW   + KLD+L+F+I  DASVR  
Sbjct: 192 AGTPEKVDMEPIGTGPFKLAQYQKDSRILFTAFADYWQ-GKSKLDRLVFSITPDASVRFA 250

Query: 255 KLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRHKPFDQLEVRQALDM 314
           K++  ECQV   P PAD+  +KA+ ++ L++K G N G++A+N +  P D ++VRQAL M
Sbjct: 251 KIEKNECQVMPFPNPADLPRMKANKDINLMSKAGLNTGFLAFNTQKPPLDNVKVRQALAM 310

Query: 315 AVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAKELLKAAGVKEGTEIT 374
           A+NK +I++AV+ G G  A N +PP  W  D  +KD  Y+PEKAK LLK AG   G  + 
Sbjct: 311 AINKPAIIDAVFHGTGTAAKNLLPPGVWGADSELKDYDYDPEKAKALLKEAGFANGVSVE 370

Query: 375 LWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRTKNGEHDVSLIGWTG 434
           LWAMPVQRPYNPNAK MAEM+Q+DWAKIG++ KIV+YEWGEY+KR K GEH  +L+GWT 
Sbjct: 371 LWAMPVQRPYNPNAKRMAEMIQADWAKIGVQTKIVTYEWGEYLKRVKGGEHQAALMGWTT 430

Query: 435 DNGDPDNWLGTLYSC-DAIGGNNYSMWCDPAYDKLIKQAKVVTDREQRTVLYKQAQQLLK 493
             GDPDN+ G L++C  A GG+N + WC   +DK+I +AK  TDR++R  LYK+AQQ++ 
Sbjct: 431 ATGDPDNFFGPLFTCTSANGGSNSAKWCYKPFDKIIAEAKSTTDRDKRVALYKEAQQMMH 490

Query: 494 QQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVF 527
            Q+P   +AHST+ +P+  +V G+++ PFG+++F
Sbjct: 491 DQMPAVMIAHSTIFEPVRKEVTGYEIDPFGKHLF 524