Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 570 a.a., peptide ABC transporter substrate-binding protein SapA from Dickeya dianthicola ME23

 Score =  338 bits (867), Expect = 3e-97
 Identities = 177/537 (32%), Positives = 293/537 (54%), Gaps = 10/537 (1%)

Query: 2   RHTTVLS-AMFATSLLA-----VATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDA- 54
           +HT  L+ A  A  +LA       T   A      V+C     + F+     +    D  
Sbjct: 4   KHTLALALAWLALPVLAQTPPTAPTPAQAIRHSGFVYCVNDVLSTFNPQMARSGLMVDTL 63

Query: 55  AEPLYNRLVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNAD 114
           A  LY+RL+  +     ++P LA  WD++ +G TY F LR  V F     F P+R  NAD
Sbjct: 64  AAQLYDRLLGVDPYTYRLMPELAQHWDVTDNGSTYRFTLRRDVPFQRTAWFTPSRTMNAD 123

Query: 115 DVLFTFNRMLDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQ 174
           DVLF+F RML+  HPF      ++PYF+ + L  N+  + K   +++ + L++ DA+F+ 
Sbjct: 124 DVLFSFQRMLNKKHPFHDVNGGDYPYFDSLQLADNVQSIRKLGDYSIEIRLHSPDASFLW 183

Query: 175 NIAMSFAAILSAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPS 234
           ++A  +A +LSAEYA+QL +  +   ++++P+GTGP+    Y+    +R   +  YW   
Sbjct: 184 HLATHYAPVLSAEYAQQLTRQDRRELLDRQPVGTGPYRLDEYRYGQYVRLKRHDDYW-RG 242

Query: 235 RVKLDQLIFAINTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYI 294
           + +++Q++  + +  + R+ KL  GEC V  +P  + +  L+ DP L+L  +PG N+ Y+
Sbjct: 243 QPRMEQVLVDLGSGGTGRLSKLLTGECDVLAYPAASQLTILRNDPRLRLSLRPGMNVAYL 302

Query: 295 AYNVRHKPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYN 354
           A+NVR  P D   VR A+ +A+N   ++ ++Y G  + A + +P   W+YD+  +   YN
Sbjct: 303 AFNVRKPPLDDSRVRHAIALAINNDRLMQSIYYGTAETAASILPRASWAYDNEAQVTEYN 362

Query: 355 PEKAKELLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWG 414
           PEKA++ LK  G+    ++ LW     + YNP+    AE++Q+D A++G++V I+  E  
Sbjct: 363 PEKARQQLKELGI-TNLQLQLWVPSASQSYNPSPVKTAELIQADLAQVGIRVTIMPVEGR 421

Query: 415 EYIKRTKNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAI-GGNNYSMWCDPAYDKLIKQAK 473
               R     HD++L GW  D+ DPD+    L SC AI    NY+ WCDP +D++++ A 
Sbjct: 422 FQEARLMEMNHDLTLAGWATDSNDPDSVFRPLLSCAAIRSQTNYAHWCDPGFDQVLQDAL 481

Query: 474 VVTDREQRTVLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGV 530
                 +R   Y+ A  +L +Q+P+ P+A S   Q     ++G  +SPFG   F+GV
Sbjct: 482 SSQQLSRRMEYYRVAHHILAEQLPVLPLASSLRMQAYRYDMKGLVLSPFGNASFAGV 538