Pairwise Alignments

Query, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 534 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  551 bits (1419), Expect = e-161
 Identities = 282/533 (52%), Positives = 371/533 (69%), Gaps = 8/533 (1%)

Query: 5   TVLSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDA-AEPLYNRLV 63
           T+  ++   S LA+A+   A  K + V+CSE SP GFD + YT     DA A P+YNRL 
Sbjct: 3   TLTRSLLIASALAMASAMPAMAK-TFVYCSEASPEGFDPSPYTAGGTFDASAHPVYNRLT 61

Query: 64  EFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRM 123
           EF+KG T V P LA KWD+S DG+ YTFHLR+GVKFHSN +F P+RDFNADDV+F++NR 
Sbjct: 62  EFKKGTTEVEPGLAEKWDVSSDGLEYTFHLRKGVKFHSNDKFTPSRDFNADDVIFSYNRQ 121

Query: 124 LDPDHPFRKAYP-TEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAA 182
            D  +P+ +      + Y+N M +   I ++ K D +TV   L   +A F+ NIAM FA+
Sbjct: 122 GDTKNPWNQYIAGITYEYYNSMEMPSLIKEIVKVDDYTVKFVLTRPEAPFLANIAMPFAS 181

Query: 183 ILSAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQLI 242
           I+S EYA+ L KAG   D N  PIGTGPF F  YQKD+ IRY  N  YW  +  K+D LI
Sbjct: 182 IVSKEYADTLEKAGTKEDFNNLPIGTGPFKFVAYQKDAVIRYQKNADYWGDAP-KIDDLI 240

Query: 243 FAINTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRHKP 302
           FAI  DA+VR+QKLKAGEC +  +P PAD+  ++AD NLKL  +PG N+ Y AYN    P
Sbjct: 241 FAITPDAAVRLQKLKAGECHLMPYPAPADLSTIRADKNLKLDEQPGLNVAYFAYNTTVAP 300

Query: 303 FDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAKELL 362
           FD+ EVR+AL+MA+NKQ+I++AV+QGAG +A N +PPT WSY+DSIKD AY+PE AK+ L
Sbjct: 301 FDKPEVRKALNMAMNKQAIIDAVFQGAGTVAKNPIPPTMWSYNDSIKDDAYDPEAAKKAL 360

Query: 363 KAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRTKN 422
           +AAGVK+ T + +WAMPVQRPY PNA+  AE++QSD+AK+G+K +IVS+EWGEY+K++  
Sbjct: 361 EAAGVKDLT-MKIWAMPVQRPYMPNARRTAELIQSDFAKVGVKAEIVSFEWGEYLKKSTE 419

Query: 423 GEHDVSLI-GWTGDNGDPDNWLGTLYSCDAI--GGNNYSMWCDPAYDKLIKQAKVVTDRE 479
              D ++I GWTGDNGDPDN++G L SC A   GG N + WC+  + +L+ +AK  TD  
Sbjct: 420 VNRDGAVILGWTGDNGDPDNFMGVLLSCAATGEGGANRAQWCNKEFSELLSKAKQTTDVA 479

Query: 480 QRTVLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGVSI 532
           +RT LY+QAQ + K+Q P   +AHST   P+SAKV GF +SP G   F  V I
Sbjct: 480 ERTKLYEQAQVIFKEQAPWATLAHSTQFVPMSAKVSGFTMSPLGDFTFENVDI 532