Pairwise Alignments

Query, 471 a.a., porin from Pseudomonas simiae WCS417

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  231 bits (589), Expect = 4e-65
 Identities = 160/481 (33%), Positives = 236/481 (49%), Gaps = 54/481 (11%)

Query: 3   LSSKALLALAI-SSITATAYAETTSQDFVPTTLAGTSAQSEAKGFIDGQSLGGTTRNWYS 61
           +   +LLALA+ + I+  A+AE+ +             Q+++KGFI+G S+ G  RN+Y 
Sbjct: 2   IKQSSLLALAVCAGISQMAFAESVTD------------QADSKGFIEGSSVTGLLRNYYM 49

Query: 62  NEMKFRGQKFGYYKNAADKAADVKTNVSRRYNWAQGTILNYSSGFTQGTVGVATEVAAYN 121
           N  +  G+                   +   +W QG +LNY+SGFTQGT+G   +  AY 
Sbjct: 50  NRNREGGR-------------------ADNIDWTQGAMLNYASGFTQGTIGFGVDAYAYG 90

Query: 122 YIALIDDQKDIAGGSNRTLAHTYGDAVGQWSKLGLANVKFRVSNTTLTAGRQNFSSGIMD 181
            + L     D   G+  T  H  GD    +  +G A VK +VS T L  G    ++ +  
Sbjct: 91  GLKLDATHADAGTGNLPTDRH--GDPEDAYGSVGAA-VKIKVSKTQLKFGDMQPTAPVFA 147

Query: 182 TIGNRALPSSFEGVSFNSEEFSNLSFQGGVFDRVSPRTEQSLSKFRSEYSS-SGVETDKV 240
           T G R LP +  G    S E + L  + G F   S  +  + +     Y++ + +  +  
Sbjct: 148 TGGTRLLPQTATGFDLTSSEIAGLDLEAGHF--TSTNSGMTSNHDHDIYATYANIAANSA 205

Query: 241 YTLGFNYQPLKSLKTSVFAANVKDFWNQYYFGATHELGDSQVLSLTTGLNYYKTVDEGKK 300
             LG  Y    SL  +V+A  ++D W QYY    + +      SL    N Y+T+D G  
Sbjct: 206 SFLGGKYTFSPSLSATVYAGELEDIWRQYYTNLNYVIPLVHDQSLALDGNLYRTLDTGSA 265

Query: 301 LMGEIDNDTYSLSLGLTH-QAHSLTFSYQEVNGNEYFDYLHETNG--------IYLANSL 351
             G I+N TYSL+   +  QAH+LT S+Q+V+G+  FDY+   N         +YLANS+
Sbjct: 266 KAGAINNTTYSLAAAYSFLQAHTLTLSFQKVHGDTPFDYIGTGNNGAGEGGDSVYLANSV 325

Query: 352 T-SDFNGPNEKSFQVAYAINMAEYGVPGLKFNIYSARGWGIDGTHYRGDNGVKDFAYNGI 410
              DFNGP E+S+ + Y +NMA YGVPGL F      G  I+GTH    +     AY G 
Sbjct: 326 QWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRYINGSDINGTHTPDHS-----AYAGD 380

Query: 411 QAQNGEHHQEYGIGSSYAIQSGPLKATTVRATYVTHRASENQSDGNLREFRLVTTIPFNI 470
              +G HH E  + + Y IQSGP K  ++R       A+ +Q DG+L E RL+   PF +
Sbjct: 381 YGDDGAHH-ETDLEAKYVIQSGPAKNLSLRVRDAIVAANADQRDGDLNELRLIVDYPFTL 439

Query: 471 L 471
           L
Sbjct: 440 L 440