Pairwise Alignments

Query, 471 a.a., porin from Pseudomonas simiae WCS417

Subject, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

 Score =  618 bits (1594), Expect = 0.0
 Identities = 309/471 (65%), Positives = 366/471 (77%), Gaps = 12/471 (2%)

Query: 1   MKLSSKALLALAISSITATAYAETTSQDFVPTTLAGTSAQSEAKGFIDGQSLGGTTRNWY 60
           MK+ +   LAL+IS+ +  A A+  SQD++P TL  +S Q++A GFIDGQSL G+TRNWY
Sbjct: 1   MKVFTLTALALSISAFSTVAQADPQSQDYLPLTLKSSSEQAQASGFIDGQSLSGSTRNWY 60

Query: 61  SNEMKFRGQKFGYYKNAADKAADVKTNVSRRYNWAQGTILNYSSGFTQGTVGVATEVAAY 120
           + E   R   + YYKN        + +   R NW QGTILNYSSGFTQGTVG A E A Y
Sbjct: 61  ARERAARAPLWKYYKNDG-----TRHDTHSRENWVQGTILNYSSGFTQGTVGFAVEAAGY 115

Query: 121 NYIALIDDQKDIAGGSNRTLAHTYGDAVGQWSKLGLANVKFRVSNTTLTAGRQNFSSGIM 180
           N IAL   ++ IAG +NRTL H+ GD VGQWSKLGL N+K RVSNTTLT GRQ+  + ++
Sbjct: 116 NAIALQQSREAIAGPNNRTLTHSDGDPVGQWSKLGLGNIKARVSNTTLTLGRQSVDTPMI 175

Query: 181 DTIGNRALPSSFEGVSFNSEEFSNLSFQGGVFDRVSPRTEQSLSKFRSEYSSSGVETDKV 240
             IGNRALPSSF+G   +S EF NLS   G FDRVSPRTEQSLSKFRSEYS++GVETD+ 
Sbjct: 176 AYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRVSPRTEQSLSKFRSEYSATGVETDRA 235

Query: 241 YTLGFNYQPLKSLKTSVFAANVKDFWNQYYFGATHELGDSQVLSLTTGLNYYKTVDEGKK 300
            T G NYQP KSL TS++A  V+DFWNQYYFGA H LGDS VLSL+TGLNYYKTVD G +
Sbjct: 236 STAGINYQPFKSLSTSLYATKVEDFWNQYYFGANHVLGDSAVLSLSTGLNYYKTVDAGSQ 295

Query: 301 LMGEIDNDTYSLSLGLTHQAHSLTFSYQEVNGNEYFDYLHETNGIYLANSLTSDFNGPNE 360
            MG+IDNDTYSLSLGLTHQAH+L+ S+Q+VNGNEYFDYLHETNGI+LANSL SDFNGPNE
Sbjct: 296 KMGKIDNDTYSLSLGLTHQAHTLSASWQQVNGNEYFDYLHETNGIFLANSLLSDFNGPNE 355

Query: 361 KSFQVAYAINMAEYGVPGLKFNIYSARGWGIDGTHYRGDNGVKDFAYNGIQAQNGEHHQE 420
           KS Q++Y +NMA YGVPGLKFN+Y+ARGWGIDGTHYRG       AY+ +   +GE H E
Sbjct: 356 KSLQLSYVLNMAPYGVPGLKFNLYNARGWGIDGTHYRGT------AYD-VNGLDGETHYE 408

Query: 421 YGIGSSYAIQSGPLKATTVRATYVTHRASENQSDGNLREFRLVTTIPFNIL 471
           +GIG+SYA+QSGPLK T++RATY THRAS+ Q DG+L EFR+VTTIPFNIL
Sbjct: 409 WGIGTSYALQSGPLKDTSIRATYTTHRASKAQGDGSLDEFRVVTTIPFNIL 459