Pairwise Alignments

Query, 532 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 542 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  460 bits (1183), Expect = e-134
 Identities = 238/536 (44%), Positives = 336/536 (62%), Gaps = 13/536 (2%)

Query: 1   MKMLPLQAAMAAALLSVA-IGVSAKPLVVCTEASPEGFDPVLYTTAVTADAAAETMFNRL 59
           +K   +   ++A L++ A    +A  LV C+E SP GFDP  YTT    DA+AETMFNRL
Sbjct: 2   LKHAVIPLIVSAGLMAAAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETMFNRL 61

Query: 60  VDFKPGTTEVVPALAKDLPEISADGLTYTFHLRDDIKFHTTDYFKPTRNMNADDVLWSFQ 119
             F+ G T V+P LA    ++S DGLTYTFHLRD +KFHTT YFKPTR  NADDVL++F 
Sbjct: 62  TQFERGGTAVIPGLATSW-DVSPDGLTYTFHLRDGVKFHTTSYFKPTRTFNADDVLFTFN 120

Query: 120 RQLDPNHPWHKKSLVGYPYFESMGFKELLKSVEKTDDHTVVFTLTRPEAPFLADLGMAFS 179
           R ++ + P+ K     +PYF  MG    +K++EK D+HTV FTL   +A F+ +L M+F+
Sbjct: 121 RMINKDDPFRKAYPTEFPYFTDMGMDTNIKNIEKVDEHTVKFTLGTVDAAFIQNLAMSFA 180

Query: 180 SIHSKEYADQLLKSGKTEDLNAKPIGTGPFVFTRYQKDAQARFKANPDYFRGKPA-VDPL 238
           SI S EYA QLLK GK  D+N KPIGTGPFVF  YQKD+  R+  N DY++ +   +D L
Sbjct: 181 SIQSAEYAAQLLKEGKPADINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKIDNL 240

Query: 239 ILAISTDNNVRLQKLKANECQIALFPKPDDIPSIKKDPNLKVDELAAMTTSYTALNTTHK 298
           I AI+TD +VR+QKLK NECQI LFP+P D+ ++  D +LK+   A     Y A N   K
Sbjct: 241 IFAITTDPSVRIQKLKKNECQITLFPRPADLKALGDDKDLKLPHQAGFNLGYIAYNVMDK 300

Query: 299 Y--------MSDARVRHAINIAFDKAGYTEALFGKGNAVVGTGPYPPTLLGFNEKLKNPP 350
                    ++D RVR A++++ +K    ++++ +G   +     PPT   ++  +K+  
Sbjct: 301 VKGSDQPNPLADLRVRQALDMSVNKQQIIDSVY-QGAGQLAVNAMPPTQWSYDTTIKDAK 359

Query: 351 RDLDKARALLKEAGVPEGTEFTLFTRNGGGPTNPNPMLGAQRMQADLAQIGLKVNIKVME 410
            D +KA++LLKEAG+ EGTE  L+      P NPN  L A+ +Q D  +IGL V I   E
Sbjct: 360 YDPEKAKSLLKEAGIKEGTEIVLWAMPVQRPYNPNAKLMAEMLQNDWKKIGLNVKITSYE 419

Query: 411 WGEMLKRAKNGEHDMVSAGWVGDNGDPDNFLTPNLSCDAAKNGENYARWCNKEFQDLIDK 470
           WGE +KR+K GE+  +  GW GDNGDPDN+L     CD+  +G N+++WC+K+F  ++ +
Sbjct: 420 WGEYIKRSKGGENQAMIIGWSGDNGDPDNWLNVLFGCDSL-SGNNFSKWCDKKFDGIVKE 478

Query: 471 ARAIAEPAQRAALYEQAQDVFDKDQPWLPMAYPKLFTAMRKNVEGFTQSPLGTNNF 526
           A+A ++ A+R  LY+QAQ +     P  P+A+  ++  MR  V+ F  SP G N+F
Sbjct: 479 AKATSDVAKRTELYKQAQHILKDAVPMTPIAHSTVYQPMRSTVQDFKISPFGLNSF 534