Pairwise Alignments

Query, 532 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  153 bits (387), Expect = 1e-41
 Identities = 136/518 (26%), Positives = 238/518 (45%), Gaps = 38/518 (7%)

Query: 8   AAMAAALLSVAIGVSAKPLVVCTEASPEGFDPVLYTTAVTADA-AAETMFNRLVDFKPGT 66
           A + A  L+  +  +A  L +        FDP+   +A   D      +++ LV      
Sbjct: 12  ATLTAWSLTAGLAQAAGVLTIGCREDSTTFDPI--KSAQNRDTWVFANVYDTLVRVDNLG 69

Query: 67  TEVVPALAKDLPEISADGLTYTFHLRDDIKFHTTDYFKPTRNMNADDVLWSFQRQLDPNH 126
           T++ P LA+   +IS DGLTYTF LRD         F     + ADD  +S  R  D   
Sbjct: 70  TKMEPGLAESW-DISKDGLTYTFKLRDA-------KFSDGSAITADDAAFSLLRIRD--- 118

Query: 127 PWHKKSLVGYPYFESMGFKELLKSVEKTDDHTVVFTLTRPEAPFLADLGMAFSSIHSKEY 186
             +K SL   P+        L+ + + +D  T+V TL  P   FL+ L     SI S++ 
Sbjct: 119 --NKASLWADPF-------NLINTAKASDPKTLVVTLKTPAVAFLSQLASPTVSILSEKA 169

Query: 187 ADQLLKSGKTEDLNAKPIGTGPFVFTRYQKDAQARFKANPDYFRGKP-AVDPLILAISTD 245
             ++ +   +E+    P+ +G F    ++K  +   K NP++++ K  ++D +     TD
Sbjct: 170 MTKMGEDAYSEN----PVTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSVTD 225

Query: 246 NNVRLQKLKANECQIALFPKPDDIPSIKKDPNLKVDELAAMTTSYTALNTTHKYMSDARV 305
           +N R++ ++ NE   A+F     +  +KKD N+ +    +    +  +N  H  ++   V
Sbjct: 226 DNTRMRMVQNNELDTAIFVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKPEV 285

Query: 306 RHAINIAFDKAGYTE-ALFGKGNAVVGTGPYPPTLLGFNEKLKNPPRDLDKARALLKEAG 364
           R A+++A DK    + A +G+G       P   +L  +   L+ P  D   A+ LL++AG
Sbjct: 286 RQALDMAIDKQSLVKTATYGQGTVAYSYIP-KGSLYHYANNLQRP-YDPTAAKKLLEQAG 343

Query: 365 VPEGTEFTLFTRNGGGPTNPNPMLGAQRMQADLAQIGLKVNIKVMEWGEMLKRAKNGEHD 424
             +      +  N G   +      A  ++  LA++G+  N++ ++  +  +   +GE+D
Sbjct: 344 AKDLK--LNYVVNAGNEADEQI---AVIIKDQLAKVGVTANLQKVDPTQSWQMLVDGEYD 398

Query: 425 MVSAGWVGDNGDPDNFLTPNLSCDAAKNGENYARWCNKEFQDLIDKARAIAEPAQRAALY 484
           +    W  D  DPD   T  L  D  +N     R+ N + + L+ +AR  A+P +R  +Y
Sbjct: 399 ISVMYWTNDILDPDQKTTFVLGHDTNQN--YMTRYKNDKVKALVAQARIEADPVKREQMY 456

Query: 485 EQAQDVFDKDQPWLPMAYPKLFTAMRKNVEGFTQSPLG 522
            + Q +  +D  W+ + Y       RKNV  F Q+PLG
Sbjct: 457 VELQKLAKQDVNWIDLYYSPYINISRKNVSNFLQNPLG 494