Pairwise Alignments

Query, 532 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 535 a.a., dipeptide ABC transporter substrate-binding protein DppA from Escherichia coli ECRC62

 Score =  481 bits (1239), Expect = e-140
 Identities = 242/527 (45%), Positives = 340/527 (64%), Gaps = 2/527 (0%)

Query: 6   LQAAMAAALLSVAIGVSAKPLVVCTEASPEGFDPVLYTTAVTADAAAETMFNRLVDFKPG 65
           L+  ++   ++VA  V AK LV C+E SPEGF+P L+T+  T DA++  ++NRLV+FK G
Sbjct: 11  LKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPLYNRLVEFKIG 70

Query: 66  TTEVVPALAKDLPEISADGLTYTFHLRDDIKFHTTDYFKPTRNMNADDVLWSFQRQLDPN 125
           TTEV+P LA+   E+S DG TYTFHLR  +K+H    FKPTR +NADDV++SF RQ +  
Sbjct: 71  TTEVIPGLAEKW-EVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQ 129

Query: 126 HPWHKKSLVGYPYFESMGFKELLKSVEKTDDHTVVFTLTRPEAPFLADLGMAFSSIHSKE 185
           +P+HK S   Y YFE MG  EL+  V+K DD+TV F LTRPEAPFLADL M F+SI SKE
Sbjct: 130 NPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKE 189

Query: 186 YADQLLKSGKTEDLNAKPIGTGPFVFTRYQKDAQARFKANPDYFRGKPAVDPLILAISTD 245
           YAD ++K+G  E L+  PIGTGPF   +YQKD++ R+KA   Y+  KP +D L+ +I+ D
Sbjct: 190 YADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPD 249

Query: 246 NNVRLQKLKANECQIALFPKPDDIPSIKKDPNLKVDELAAMTTSYTALNTTHKYMSDARV 305
            +VR  KL+ NECQ+  +P P DI  +K+D ++ + E+  +   Y + N   K + D +V
Sbjct: 250 ASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKV 309

Query: 306 RHAINIAFDKAGYTEALFGKGNAVVGTGPYPPTLLGFNEKLKNPPRDLDKARALLKEAGV 365
           R A+  A +K    +A++ +G  V      PPT+ G+N+ +++   D +KA+ALLKEAG+
Sbjct: 310 RQALTYAVNKDAIIKAVY-QGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGL 368

Query: 366 PEGTEFTLFTRNGGGPTNPNPMLGAQRMQADLAQIGLKVNIKVMEWGEMLKRAKNGEHDM 425
            +G    L+      P NPN    A+ +QAD A++G++  I   EWGE LKRAK+GEH  
Sbjct: 369 EKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQT 428

Query: 426 VSAGWVGDNGDPDNFLTPNLSCDAAKNGENYARWCNKEFQDLIDKARAIAEPAQRAALYE 485
           V  GW GDNGDPDNF     SC A++ G NY++WC K F+DLI  ARA  +  +R  LY+
Sbjct: 429 VMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYK 488

Query: 486 QAQDVFDKDQPWLPMAYPKLFTAMRKNVEGFTQSPLGTNNFATTQVK 532
           QAQ V     P L +A+  +F  +RK V+G+   PLG ++F    ++
Sbjct: 489 QAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE 535