Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas simiae WCS417

Subject, 932 a.a., DNA polymerase I (EC 2.7.7.7) from Sphingobium sp. HT1-2

 Score =  620 bits (1599), Expect = 0.0
 Identities = 377/950 (39%), Positives = 531/950 (55%), Gaps = 48/950 (5%)

Query: 3   QAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPNSP----FAVV 58
           Q  L LVDGS Y++RA+H LPPLT   G P GAV G   ML  L ++   +      AVV
Sbjct: 4   QNHLYLVDGSGYIFRAYHQLPPLTNQHGQPVGAVYGYTTMLWKLAEELGKAEGPTHLAVV 63

Query: 59  FDAKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTL 118
            D    TFR++MY +YKANRP  P+D+  Q   +  +  A   P +   G EADD+I + 
Sbjct: 64  LDKGSHTFRNDMYDQYKANRPPAPEDLVPQFPMIRDATRAFSLPCIEEAGFEADDIIASY 123

Query: 119 ARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLA 178
            +++  A   V I + DKD+ QL+   + + +TM       + V  KFGV PEQ+ D LA
Sbjct: 124 TQAAVRAGWHVTIVSSDKDLMQLIQPGVDMYDTMKNERRGADYVMGKFGVLPEQLGDVLA 183

Query: 179 LMGDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPSLPIRGAKTLPAKLEEHR 238
           LMGDS DN+PGVPGIGPKTA+ L+         L   LD  PS+       +   L  H 
Sbjct: 184 LMGDSVDNVPGVPGIGPKTAAKLITEYG----TLEAALDAAPSMK---KSKMQENLIAHA 236

Query: 239 EMAFLSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRVEL 298
           +MA LS +L  +   + L   LDDL L    +E L    +   FK+  + +   A  V +
Sbjct: 237 DMARLSRRLVALHDSMDLPEPLDDLTLKGIPKEPLQAFLSHHGFKTLLNRLGAPAATVAV 296

Query: 299 KAA---------PAVEAVVETVAPTE--ASYTTILDQATFDIWLKKLNEATLFAFDTETT 347
            +A         P    V+E   P    A Y T+       +W+ +     + A DTET 
Sbjct: 297 ASAAAATNGADAPPPPPVIEVEHPPIDCALYETVTTVEALQVWIDEARALGVVAVDTETD 356

Query: 348 GIDAQQAQLVGVSFAVQPHEAAYIPLTHS-----YIGAPQQLDRDTVLLALKPLLEDPTK 402
            +D+ ++ LVG+S +  P  A YIPL H      +   PQQ+  D  +  LKPLL D   
Sbjct: 357 ALDSMESGLVGISLSTGPGRACYIPLAHRSADDMFGEVPQQIALDDAIRLLKPLLADDAV 416

Query: 403 LKVGQHAKFDMNILANCAIGGDPAHGITVRGIAFDTMLESYVLNSTATR--HDMDSLAKK 460
           LKVG + K+D+N+LA   +   P           D+M+ S+ L++  +   H MD  A  
Sbjct: 417 LKVGHNIKYDLNVLARVGLEVTPID---------DSMVMSFDLDAGKSLGGHGMDEAASV 467

Query: 461 YLDYDTVAFQDIAGKGAKQLTFDQIALEQAGPYAAEDADITLRLHQELFAQLSAIPSLAS 520
           +L++  ++F+++ G G K ++F  + L++A  YAAEDA++T RL  +L  +L A      
Sbjct: 468 HLNHTCISFKEVTGTGKKAISFAHVPLDKATAYAAEDAEVTWRLWHKLSGRLPA-EGATR 526

Query: 521 VLTDIEIPLVPVLARIERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPK 580
           V   ++ PL+PV+A +ERQG  VD++ L   S      +  LE +  E+AG  F +GSP+
Sbjct: 527 VYQLVDRPLIPVVAGMERQGIKVDREALSRLSGSFSQSIAGLEAEIHELAGHPFTIGSPQ 586

Query: 581 QLGAILYEKLGLPVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDR 640
           QLG +L++++GL   KK   G  ST   VL KL  +   +  +++++R +SKLKSTYTD 
Sbjct: 587 QLGVVLFDEMGLKGGKKGKSGTYSTDVTVLEKLKAEGSAICGLVLEWRQLSKLKSTYTDA 646

Query: 641 LPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLA 700
           L +QIN  TGR+HTSY    A TGRLSS+DPNLQNIP+RT  GR+IR AFVA  G  +LA
Sbjct: 647 LQQQINRDTGRVHTSYSLTGAQTGRLSSTDPNLQNIPIRTEIGRQIRHAFVAEPGNVILA 706

Query: 701 ADYSQIELRIMAHLSKDEGLMNAFRDNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFG 760
           ADYSQIELR+ AH++    L +AF    D+H  TA E+F    G+V  D R  AK INF 
Sbjct: 707 ADYSQIELRLAAHMADVPALKDAFEQGEDIHNRTAMELF----GEVNRDTRGRAKTINFA 762

Query: 761 LIYGMGAQKLGKDIGVDTKTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRL 820
           ++YG+    L   + +    A+  I  Y+ R+PG+  Y+  T  +A   G+ ET FGR+ 
Sbjct: 763 ILYGISRWGLAGRLEISADEAQDMISRYYERFPGISVYINETLEKARANGFTETLFGRKT 822

Query: 821 YLPDINSNKPQERAAAERTAINAPMQGTAADIIKKAMVRVDNWLTESGLD-AKVILQVHD 879
           + P I +    ER  AER AINAP+QGT+ADIIK+AM R+   L  +GL   +++LQVHD
Sbjct: 823 WFPRIKAPVQHERQGAERAAINAPIQGTSADIIKRAMARMGPALEAAGLPRVRMLLQVHD 882

Query: 880 ELVVEVREDLVAQVSEKIREHMSAAAQ----LDVPLLVEVGVGNNWDEAH 925
           ELV E+ E  V   S+ IR+ M +AA+    L VPL VE+G G +W  AH
Sbjct: 883 ELVFELPEGDVEAASKVIRQVMESAAEPMVSLSVPLGVEIGTGPSWGAAH 932