Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas simiae WCS417

Subject, 928 a.a., DNA polymerase I (NCBI) from Escherichia coli BW25113

 Score = 1063 bits (2749), Expect = 0.0
 Identities = 560/934 (59%), Positives = 690/934 (73%), Gaps = 22/934 (2%)

Query: 3   QAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPNSPFAVVFDAK 62
           Q PL+LVDGSSYLYRA+HA PPLT S G PTGA+ GVLNML+SL  QY  +  AVVFDAK
Sbjct: 6   QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65

Query: 63  GGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLARSS 122
           G TFRDE++  YK++RP MPDD+R QIEPLH  V A+G PLL V GVEADDVIGTLAR +
Sbjct: 66  GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125

Query: 123 AAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLALMGD 182
             A RPV+ISTGDKDMAQLV  +ITL+NTMT + +  E V  K+GV PE IID+LALMGD
Sbjct: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185

Query: 183 SSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPSLPIRGAKTLPAKLEEHREMAF 242
           SSDNIPGVPG+G KTA  LL G+ GG+  LY + + +  L  RGAKT+ AKLE+++E+A+
Sbjct: 186 SSDNIPGVPGVGEKTAQALLQGL-GGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244

Query: 243 LSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRVELKAAP 302
           LSYQLATIK DV L++  + L + +P  E+LL L+   EFK W  +++   K ++ K A 
Sbjct: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEA-GKWLQAKGAK 303

Query: 303 AVEAVVETVAPTEA-----------SYTTILDQATFDIWLKKLNEATLFAFDTETTGIDA 351
                 ET    EA           +Y TILD+ T   W+ KL +A +FAFDTET  +D 
Sbjct: 304 PAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDN 363

Query: 352 QQAQLVGVSFAVQPHEAAYIPLTHSYIGAPQQLDRDTVLLALKPLLEDPTKLKVGQHAKF 411
             A LVG+SFA++P  AAYIP+ H Y+ AP Q+ R+  L  LKPLLED   LKVGQ+ K+
Sbjct: 364 ISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKY 423

Query: 412 DMNILANCAIGGDPAHGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVAFQD 471
           D  ILAN        +GI +RGIAFDTMLESY+LNS A RHDMDSLA+++L + T+ F++
Sbjct: 424 DRGILAN--------YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEE 475

Query: 472 IAGKGAKQLTFDQIALEQAGPYAAEDADITLRLHQELFAQLSAIPSLASVLTDIEIPLVP 531
           IAGKG  QLTF+QIALE+AG YAAEDAD+TL+LH +++  L       +V  +IE+PLVP
Sbjct: 476 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVP 535

Query: 532 VLARIERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLG 591
           VL+RIER G  +D  +L   S EL  ++ ELE++A EIAGEEFNL S KQL  IL+EK G
Sbjct: 536 VLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQG 595

Query: 592 LPVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGR 651
           +  LKKT  G  ST+EEVL +LA D YPLPKV+++YR ++KLKSTYTD+LP  INP+TGR
Sbjct: 596 IKPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGR 654

Query: 652 IHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIM 711
           +HTSYHQAV ATGRLSS+DPNLQNIPVR  EGRRIRQAF+AP+ Y +++ADYSQIELRIM
Sbjct: 655 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIM 714

Query: 712 AHLSKDEGLMNAFRDNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFGLIYGMGAQKLG 771
           AHLS+D+GL+ AF +  D+H ATAAEVF + L  VTS+QRRSAKAINFGLIYGM A  L 
Sbjct: 715 AHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLA 774

Query: 772 KDIGVDTKTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQ 831
           + + +  K A+ Y+D+YF RYPGV EYMERTRAQA +QGYVET  GRRLYLPDI S+   
Sbjct: 775 RQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGA 834

Query: 832 ERAAAERTAINAPMQGTAADIIKKAMVRVDNWLTESGLDAKVILQVHDELVVEVREDLVA 891
            RAAAER AINAPMQGTAADIIK+AM+ VD WL       ++I+QVHDELV EV +D V 
Sbjct: 835 RRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVD 894

Query: 892 QVSEKIREHMSAAAQLDVPLLVEVGVGNNWDEAH 925
            V+++I + M    +LDVPLLVEVG G NWD+AH
Sbjct: 895 AVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928