Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas simiae WCS417

Subject, 912 a.a., DNA polymerase I (EC 2.7.7.7) from Kangiella aquimarina DSM 16071

 Score = 1002 bits (2591), Expect = 0.0
 Identities = 539/930 (57%), Positives = 677/930 (72%), Gaps = 33/930 (3%)

Query: 5   PLVLVDGSSYLYRAFHA--LPPLTTSKGLPTGAVKGVLNMLKSLRKQYPNSPFAVVFDAK 62
           P +LVDGSSYL+RA+H   L  +T SKG+ TGAV GV+NMLKSL K++     AVVFDAK
Sbjct: 7   PFILVDGSSYLFRAYHVPQLQRMTNSKGMMTGAVFGVINMLKSLIKEFEPEHMAVVFDAK 66

Query: 63  GGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLARSS 122
           G TFR+++Y EYKANRP MP+D+R QIEP+H+ V A+G PLL +EGVEADDVIGTLA+ +
Sbjct: 67  GKTFRNDLYPEYKANRPPMPEDLRQQIEPIHEIVKAMGLPLLVIEGVEADDVIGTLAKQA 126

Query: 123 AAADRPVVISTGDKDMAQLVDGHITLVNTM--TGSAMDIEGVKEKFGVAPEQIIDYLALM 180
               R  +ISTGDKDMAQLV  H+TL+NTM       D E V EKFGV PEQIIDYLAL+
Sbjct: 127 CNEGRETLISTGDKDMAQLVSEHVTLINTMDKNNPITDRERVVEKFGVKPEQIIDYLALV 186

Query: 181 GDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPSLPIRGAKTLPAKLEEHREM 240
           GD  DNIPGV   GPKTA   L        E Y+ L  V    I  A  +  K+ E+   
Sbjct: 187 GDKVDNIPGVDKCGPKTAVKWL--------EQYDSLQGV----IDHADEIGGKIGENLRE 234

Query: 241 AF----LSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRV 296
           A     LSY+LATIK D  L+    +L++  PD ++L +LY  +EFK W  E+ ++    
Sbjct: 235 AIDRLPLSYELATIKLDCELEYKPGELNIGNPDHKELKKLYGEMEFKRWLTEVLKELGEG 294

Query: 297 ELKAAPAVEAVVETVAPTEASYTTILDQATFDIWLKKLNEATLFAFDTETTGIDAQQAQL 356
           + +++   E+         + Y TIL+Q   D W++KL EA LF+FDTETT ++  +A+L
Sbjct: 295 D-ESSQDGESESGVALVDRSKYETILEQQDLDKWIQKLKEAELFSFDTETTSLNYIEAEL 353

Query: 357 VGVSFAVQPHEAAYIPLTHSYIGAPQQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMNIL 416
           VG+SF +   EAAY+P+ HSY+GAP+QLDR  VL  L+PLLE     KVGQ+ K+DM++L
Sbjct: 354 VGMSFGLDNGEAAYLPVAHSYMGAPKQLDRGEVLEKLRPLLESEKHKKVGQNLKYDMSVL 413

Query: 417 ANCAIGGDPAHGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVAFQDIAGKG 476
           AN        +GI + GI FDTMLESY LNS A+RHDMD+LA  +L++  + F++IAGKG
Sbjct: 414 AN--------YGIELGGIEFDTMLESYCLNSVASRHDMDTLALHHLNHVNIKFEEIAGKG 465

Query: 477 AKQLTFDQIALEQAGPYAAEDADITLRLHQELFAQLSAIPSLASVLTDIEIPLVPVLARI 536
             QLTFDQI +EQA PYAAEDADIT+RLHQ+L+ +L        V   IE+PL+ VL+++
Sbjct: 466 KNQLTFDQIEIEQAAPYAAEDADITMRLHQKLWPELKESEGPTQVFEHIEMPLLRVLSKV 525

Query: 537 ERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLGLPVLK 596
           ER G LVD  LL  +S     ++ ELE++AFEIAG+EFNLGSPKQL +I YE+LGLP+LK
Sbjct: 526 ERNGVLVDGKLLLEKSHLFEKRLKELEKEAFEIAGKEFNLGSPKQLQSIFYEELGLPILK 585

Query: 597 KTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSY 656
           KT KGQ STAEEVL +LA D YPLPK+++++RS+SKLKSTYTD+LP+ IN +TGR+HTSY
Sbjct: 586 KTPKGQPSTAEEVLQELALD-YPLPKLILEHRSLSKLKSTYTDKLPQMINDKTGRVHTSY 644

Query: 657 HQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLSK 716
           HQAVAATGRLSS+DPNLQNIP++T EGR IR AF+APKG+K+LAADYSQIELRIMAHLS+
Sbjct: 645 HQAVAATGRLSSTDPNLQNIPIKTEEGRSIRTAFIAPKGHKILAADYSQIELRIMAHLSQ 704

Query: 717 DEGLMNAFRDNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFGLIYGMGAQKLGKDIGV 776
           D+GL+ AF + LDVH+ATAAEVF V L +VTS+QRR+AKAINFGLIYGM A  L K I  
Sbjct: 705 DKGLLKAFEEGLDVHSATAAEVFDVPLEEVTSNQRRNAKAINFGLIYGMSAFGLAKQIDT 764

Query: 777 DTKTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERAAA 836
           D  TA+ YI+ YFARYPGV  YME TR +AAD GYVET +GRRLYLP+I+S     R AA
Sbjct: 765 DRNTAQDYINTYFARYPGVETYMESTRQKAADLGYVETLYGRRLYLPEIHSKNGMRRKAA 824

Query: 837 ERTAINAPMQGTAADIIKKAMVRVDNWLTE-SGLDAKVILQVHDELVVEVREDLVAQVSE 895
           ERTAINAPMQG+AADIIK AM+ VD WL +  G+  K+I+QVHDELV EV E  +    +
Sbjct: 825 ERTAINAPMQGSAADIIKLAMLEVDKWLQDVKGI--KMIMQVHDELVFEVEESQLELAQK 882

Query: 896 KIREHMSAAAQLDVPLLVEVGVGNNWDEAH 925
           KI E M + A+L VPL+ +VG+G NW+EAH
Sbjct: 883 KIPELMESVAELSVPLIADVGIGENWEEAH 912