Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas simiae WCS417

Subject, 937 a.a., DNA polymerase I from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  649 bits (1673), Expect = 0.0
 Identities = 402/955 (42%), Positives = 563/955 (58%), Gaps = 61/955 (6%)

Query: 6   LVLVDGSSYLYRAFHALP--PLTTSKGLPTGAVKGVLN-MLKSLRKQYPNSPFAVVFDAK 62
           L L+D  + +YRA  A    P   SKGL TG + G  N +L+ + KQ P S  AV FD  
Sbjct: 9   LFLLDAMALIYRAHFAFSKNPRINSKGLNTGIMLGFTNTLLEVIEKQSP-SHIAVAFDTA 67

Query: 63  GGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLARSS 122
             TFR E +  YKANR   P+D+ + I  + Q V     P+L ++G EADD+IGT+A+ +
Sbjct: 68  APTFRHEQFEAYKANRQEQPEDITVGIPWVKQIVDGFNIPILELDGYEADDIIGTIAKKA 127

Query: 123 AAADRPVVISTGDKDMAQLVDGHITLVN-TMTGSAMDIEGVKE---KFGVA-PEQIIDYL 177
              D  V + T DKD  QLV+ HI L      G+A+D+ G KE   K+ +  P+Q+ D L
Sbjct: 128 EYKDFEVYMMTPDKDYGQLVEEHIFLYKPAFMGNAVDVMGPKEVCAKWEIEDPDQVRDIL 187

Query: 178 ALMGDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPSLPIRGAKTLPAKLEEH 237
            LMGD+ DNIPG+PGIG KTA  LL    G I+ L E +       ++G +     +E  
Sbjct: 188 GLMGDAVDNIPGIPGIGEKTAKKLLKAY-GTIEGLLEHVG-----DLKGKQK--ENVENF 239

Query: 238 REMAFLSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKS-----WFDEIQRD 292
            +   LS  LATIK DVP++   +DL    PD EKL  L+  +EF++     + +++++ 
Sbjct: 240 GQQGLLSKSLATIKQDVPIEFNPEDLTYDGPDEEKLKALFAEMEFRTLTQRVFGEKMKKP 299

Query: 293 AKRVE----LKAAPAVEAVVE---------------TVAPTEASYTTILDQATFDIWLKK 333
           A +V     L   PA +A  E               TV     +Y  +   A     ++ 
Sbjct: 300 AVKVNEQLGLFTGPAEDAEEEEVEEANPIPVPDQLATVTSMVHAYHKVEGLAAIKELVEY 359

Query: 334 LNEATLFAFDTETTGIDAQQAQLVGVSFAVQPHEAAYIPLTHSYIGAPQQLDRDTVLLAL 393
           L     F FDTETT +D  +A+LVG+SFA  P EA YIP+         Q +   +L  L
Sbjct: 360 LEIQDEFCFDTETTDLDPNKAELVGLSFAYVPGEAFYIPVP------ADQEETKKLLEPL 413

Query: 394 KPLLEDPTKLKVGQHAKFDMNILANCAIGGDPAHGITVRGIAFDTMLESYVLNSTATRHD 453
           + + ED +  K+GQ+ K+D  +L N        +GI ++G  +DTML  Y++     +H+
Sbjct: 414 RGVFEDESITKIGQNIKYDALVLKN--------YGIALKGKLYDTMLAHYLIEPEG-KHN 464

Query: 454 MDSLAKKYLDYDTVAFQDIAGK-GAKQLTFDQIALEQAGPYAAEDADITLRLHQELFAQL 512
           MD LA+ YL Y  V+ + + GK G  Q       +++   YA+EDADITL+L Q+L   L
Sbjct: 465 MDWLAEHYLQYRPVSIETLIGKKGKSQGNMRDADVDKVVEYASEDADITLQLAQKLNPDL 524

Query: 513 SAIPSLASVLTDIEIPLVPVLARIERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGE 572
                L  +  ++E PL+PVL  +E +G  +DK+ L   S  L   + E+E + +++AG 
Sbjct: 525 KE-RGLEKLFYEVETPLIPVLTAMEYEGVKIDKESLAELSTALEKDITEIEARVYDLAGV 583

Query: 573 EFNLGSPKQLGAILYEKLGL-PVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMS 631
           +FNL SPKQLG +L+ K+ L P  KKT  GQ +T EEVL+KLA   + + + ++ YR + 
Sbjct: 584 KFNLASPKQLGEVLFVKMELDPKAKKTKTGQYATGEEVLSKLAPK-HEIARAILDYRELV 642

Query: 632 KLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFV 691
           KLK+TY D LP  INP+T RIHT+Y+Q VAATGRLSS +PNLQNIP+RT  GR IR+AFV
Sbjct: 643 KLKNTYVDTLPTLINPKTDRIHTTYNQVVAATGRLSSINPNLQNIPIRTERGREIRKAFV 702

Query: 692 A-PKGYKLLAADYSQIELRIMAHLSKDEGLMNAFRDNLDVHTATAAEVFKVELGDVTSDQ 750
              + + +LAADYSQIELRIMA  SKDE +M AFR+  D+H+ TAA++F+V L +VTS+ 
Sbjct: 703 PRDEAHVILAADYSQIELRIMAAFSKDESMMEAFREGRDIHSTTAAKIFQVPLEEVTSEM 762

Query: 751 RRSAKAINFGLIYGMGAQKLGKDIGVDTKTAKAYIDVYFARYPGVREYMERTRAQAADQG 810
           RR AK  NFG+IYG+ A  L + + +    AK  ID YF  +P V +YM     +A    
Sbjct: 763 RRKAKTANFGIIYGISAFGLSQRLNIPRGEAKEIIDAYFKEFPAVSQYMNDCIEKARKNE 822

Query: 811 YVETFFGRRLYLPDINSNKPQERAAAERTAINAPMQGTAADIIKKAMVRVDNWLTESGLD 870
           YVET  GRR YL DINS     R  +ER AINAP+QG+AAD+IK AM+ V  W+ E  L 
Sbjct: 823 YVETILGRRRYLRDINSRNATMRGYSERNAINAPIQGSAADMIKVAMIHVHQWMLEKQLK 882

Query: 871 AKVILQVHDELVVEVREDLVAQVSEKIREHMSAAAQLDVPLLVEVGVGNNWDEAH 925
           +K+ILQVHDELV +  +D V  + ++I + M+ A +++VP+ VEVGVG +W EAH
Sbjct: 883 SKMILQVHDELVFDAHKDEVDLLKKEIPKLMTKALEIEVPMQVEVGVGKDWLEAH 937