Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas simiae WCS417

Subject, 998 a.a., DNA polymerase I from Agrobacterium fabrum C58

 Score =  702 bits (1811), Expect = 0.0
 Identities = 423/1014 (41%), Positives = 580/1014 (57%), Gaps = 116/1014 (11%)

Query: 6   LVLVDGSSYLYRAFHALPPLTT-SKGLPTGAVKGVLNMLKSLRKQYPNSP-------FAV 57
           L LVDGS +++RAFHA+PPL   S GLP  AV G  NML  L K   N+        FAV
Sbjct: 7   LFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVTPTHFAV 66

Query: 58  VFDAKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGT 117
           +FD    TFR+E+Y  YKANR + P+D+  Q   + ++  A   P +  EG EADD+I T
Sbjct: 67  IFDYSSKTFRNELYDLYKANRSAPPEDLVPQFGLIREATRAFNLPCIETEGFEADDIIAT 126

Query: 118 LARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYL 177
            AR + A    V I + DKD+ QLV  ++ + + M    + +  V EK+GV PE++ID  
Sbjct: 127 YARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGVPDVIEKWGVGPEKMIDLQ 186

Query: 178 ALMGDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPSLPIRGAKTLPAKLEEH 237
           A+ GDS+DN+PG+PGIGPKTA+ LL        E Y  LD   +L  R  +    K  E+
Sbjct: 187 AMTGDSTDNVPGIPGIGPKTAAQLL--------EEYGDLD---TLLARAGEIKQQKRREN 235

Query: 238 ----REMAFLSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQR-- 291
                E+A LS QL  ++ DVPL+  L++L L   +  KL+     +EF +    +    
Sbjct: 236 IIANAELARLSRQLVALRTDVPLEQSLEELVLEPQNGPKLIAFLKAMEFTTLTRRVAEAT 295

Query: 292 ------------------DAKRVELKA---------------------APAVEAVVETVA 312
                             DA   +L A                     APA   + E   
Sbjct: 296 DSDASAIDPANVPVQWGADAHGPDLDAPAAAMAGDVSAEGNNRPASAVAPAKRMIGEGST 355

Query: 313 PTE----------------ASYTTILDQATFDIWLKKLNEATLFAFDTETTGIDAQQAQL 356
           P +                 +YT I D AT D+W+    EA + AFDTETT +D  QA+L
Sbjct: 356 PADLTTARQALFAATKIDTTAYTAIRDIATLDLWIAAAREAGVVAFDTETTSLDPMQAEL 415

Query: 357 VGVSFAVQPH---------EAAYIPLTHSYIGAPQQLDRDTVLLA------------LKP 395
           VG S A+  +          AAY+PLTH   G+   L  D + LA            LK 
Sbjct: 416 VGFSLAIADNGKDASGTDIRAAYVPLTHK-TGSGGDLFSDGIKLAEGQAPFAEALERLKD 474

Query: 396 LLEDPTKLKVGQHAKFDMNILANCAIGGDPAHGITVRGIAFDTMLESYVLNSTATRHDMD 455
           LLED   LKV Q+ K+D  ++          HG+ +R    DTML SYVL +  T H MD
Sbjct: 475 LLEDEAVLKVAQNLKYDYLLMKR--------HGVVMRSFD-DTMLISYVLEAGKTTHGMD 525

Query: 456 SLAKKYLDYDTVAFQDIAGKGAKQLTFDQIALEQAGPYAAEDADITLRLHQELFAQLSAI 515
           +L++++L +  +A++D+ G G   +TFD + +++A  YAAEDAD+TLRL   L  +L + 
Sbjct: 526 TLSERWLGHTPIAYKDVTGSGKSSITFDFVNIDKATAYAAEDADVTLRLWMALKPRLVS- 584

Query: 516 PSLASVLTDIEIPLVPVLARIERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFN 575
             L  V   +E PLVPVLA +E +G  VD+ +L   S EL  K    E + +E+AGE FN
Sbjct: 585 ERLTKVYERLERPLVPVLAHMEERGITVDRQILSRLSGELAQKAASFEEEIYELAGERFN 644

Query: 576 LGSPKQLGAILYEKLGLPVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKS 635
           +GSPKQLG IL+ ++GLP   KT  GQ ST+ +VL  LA +   LP+ ++ +R ++KLKS
Sbjct: 645 IGSPKQLGDILFGRMGLPGGSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKS 704

Query: 636 TYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKG 695
           TYTD LP  I+P T R+HTSY  A   TGRLSSS+PNLQNIPVRTAEGR+IR AF++  G
Sbjct: 705 TYTDALPSYIHPETKRVHTSYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPG 764

Query: 696 YKLLAADYSQIELRIMAHLSKDEGLMNAFRDNLDVHTATAAEVFKVELGDVTSDQRRSAK 755
           +KLL+ADYSQIELR++AH++    L NAF + +D+H  TA+E+F V +  + S+ RR AK
Sbjct: 765 HKLLSADYSQIELRVLAHVADIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAK 824

Query: 756 AINFGLIYGMGAQKLGKDIGVDTKTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETF 815
           AINFG+IYG+ A  L   + +    A  YI  YF R+PG+R+YME T+A A + GYVET 
Sbjct: 825 AINFGIIYGISAFGLANQLSIARSEAGDYIKKYFERFPGIRDYMEATKAFARENGYVETI 884

Query: 816 FGRRLYLPDINSNKPQERAAAERTAINAPMQGTAADIIKKAMVRVDNWLTESGLDAKVIL 875
           FGRR + P+I S+ P  +A  ER AINAP+QG+AADII++AM+R++  L    L A+++L
Sbjct: 885 FGRRAHYPEIRSSNPSVKAFNERAAINAPIQGSAADIIRRAMIRIEPALEAEKLSARMLL 944

Query: 876 QVHDELVVEVREDLVAQVSEKIREHMSAAA----QLDVPLLVEVGVGNNWDEAH 925
           QVHDEL+ EV E  + +    +   M  AA     + VPL V+    +NWDEAH
Sbjct: 945 QVHDELIFEVEEAEIEKTLPVVVSVMEDAAMPAISMRVPLKVDARAADNWDEAH 998