Pairwise Alignments

Query, 336 a.a., dipeptide ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Erwinia tracheiphila SCR3

 Score =  449 bits (1154), Expect = e-131
 Identities = 221/339 (65%), Positives = 272/339 (80%), Gaps = 3/339 (0%)

Query: 1   MFSFIARRLGLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVDPEMHAQAMERLGLNK 60
           M  FI RRLGL+IPTF GITLLTFA + MIPGDPV +M GER + PE HAQ + ++GL+K
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVLIMAGERGMSPERHAQLLAQMGLDK 60

Query: 61  PLYAQYLDYVGKLAQGDLGESLRTRTSVWTEFTALFPATLELSMAALLFAGILGLLAGVI 120
           PL+ QY+ Y+  +  GDLG SL++R  VW EF   F ATLEL + A++FA  +G+  GV+
Sbjct: 61  PLWQQYIAYIQGVLHGDLGISLKSRIPVWQEFVPRFKATLELGICAMIFAIAVGIPVGVL 120

Query: 121 AALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRID---LLYDIEP 177
           AA+KRGS+FDH  +GISL GYSMPIFWWG++LIM  SV L  TPV+GRI     L D +P
Sbjct: 121 AAVKRGSIFDHTAVGISLTGYSMPIFWWGMMLIMLVSVQLNLTPVAGRIGDTVFLDDSKP 180

Query: 178 RTGFMLIDTLLADEPDAFWDALHHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTA 237
            TGFMLIDTLL  EP    DA+ H+ILPAIVLGTIPLAVI RMTRS+MLEVL EDYIRTA
Sbjct: 181 LTGFMLIDTLLWGEPGDVKDAVMHMILPAIVLGTIPLAVIVRMTRSAMLEVLGEDYIRTA 240

Query: 238 KAKGLSPARVVFVHGLRNALIPVLTVVGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGA 297
           +AKGL+P RV+ VH LRNA++PV+TV+GLQVGTLLAGA+LTETIFSWPG+G+WLI+A+  
Sbjct: 241 RAKGLTPLRVIVVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 298 RDYPVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR 336
           RDYPVVQ+G+L++A L+ILVN +VD+LYG  NPRIRH++
Sbjct: 301 RDYPVVQSGVLMVATLIILVNLLVDLLYGVVNPRIRHKK 339