Pairwise Alignments

Query, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  390 bits (1001), Expect = e-113
 Identities = 192/300 (64%), Positives = 240/300 (80%)

Query: 1   MTTPTPVSAVDQSLLYPSPYKEFWQAFSKNKGAVAGLLFMLLIVFCAIFAPWVAPHNPSE 60
           M +   VSA  +S   P P +EFW AFS N+GAV GL+ ++L++  A+FAPW+APH P+E
Sbjct: 1   MASTQTVSAGAKSTAPPGPLREFWAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNE 60

Query: 61  QYRDFLLTPPAWLEGGQMQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILL 120
                 L PPAW +GG   +LLGTD +GRD+LSRL+ G+RLSL IG++ V +S++ G++L
Sbjct: 61  TNSAVFLQPPAWQQGGSTSYLLGTDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVL 120

Query: 121 GLFAGFFPRLLGPTIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRL 180
           GL AGFF  +L   IMRLMDI+L LPSLLLA+ IVAILGPGL+N ++A+AIV LP YVR+
Sbjct: 121 GLIAGFFRGVLEIAIMRLMDIVLTLPSLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRI 180

Query: 181 TRAAVMGELNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGF 240
           TRAAV+ E++RDYVTAAR++GAG  RLMF  VLPNC APLIVQA+L  S+AILDAAALGF
Sbjct: 181 TRAAVIAEVSRDYVTAARVSGAGTLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGF 240

Query: 241 LGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK 300
           LGLG QPP+PEWGTMLA AR+++ RAWWVV+ PGL IL++VLA NL+GDGLRDALDPKLK
Sbjct: 241 LGLGAQPPSPEWGTMLADAREFVLRAWWVVTFPGLAILMAVLAFNLLGDGLRDALDPKLK 300