Pairwise Alignments

Query, 322 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  265 bits (676), Expect = 3e-75
 Identities = 139/254 (54%), Positives = 185/254 (72%), Gaps = 2/254 (0%)

Query: 3   LLEIKNLNVRF-GDKTAVPVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGLIEHPGI 61
           LL+++ L+V F G    V  V GLD+++ +GE LA+VGESG GKS T +AL+ L+  PG 
Sbjct: 13  LLDVRGLDVFFLGSNGPVQAVRGLDLTLQRGETLALVGESGCGKSTTALALLRLLA-PGA 71

Query: 62  VTADALNFDGKDMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVLRLHLKM 121
           V   ++ FDG+D+L LS  Q R++ G++++M+FQ+PMT+LNP +T+G QIEE LR H K+
Sbjct: 72  VLRGSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEETLRRHEKL 131

Query: 122 SGKQARKRAIELLEKVEIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPTT 181
           S   ARKRAIELL+ V IP    R+D +PH LSGG  QRV IAMA+A +P+LL+ADEPTT
Sbjct: 132 SALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVADEPTT 191

Query: 182 ALDVTIQAQIMELLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVEVGQVPQLF 241
           ALDVTIQAQI+ELL  L++E +M L+LITHDL +VA+ A RV VMY G+ VE     +LF
Sbjct: 192 ALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEASTSRLF 251

Query: 242 DIPAHPYSEALLKA 255
             P+H Y+  LL A
Sbjct: 252 AAPSHAYTRGLLGA 265



 Score =  167 bits (422), Expect = 8e-46
 Identities = 96/257 (37%), Positives = 149/257 (57%), Gaps = 9/257 (3%)

Query: 3   LLEIKNLNVRFGDKTA--VPVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGLIEHPG 60
           LL +++L   +  +    +  VDG+   +  GE + +VGESG GKS     L+ L+    
Sbjct: 320 LLSVQDLRTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRLVNP-- 377

Query: 61  IVTADALNFDGKDMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVLRLHLK 120
              +  + FDG D+ +LS +  +    + + MVFQDP  +LNP  +V   IE VL++H  
Sbjct: 378 --ASGRIVFDGTDIAQLSEKALKPW-RRRVQMVFQDPYASLNPRRSVFDIIESVLKVHGV 434

Query: 121 MSGKQARKRAIELLEKVEIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEPT 180
               + R R   +LE+V +P  A R   +P++ SGG  QR+ IA A+   P L++ DEP 
Sbjct: 435 ADRAERRNRIAAILERVGLPADAGRR--FPNEFSGGQRQRIGIARALVLRPSLVVLDEPV 492

Query: 181 TALDVTIQAQIMELLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVEVGQVPQL 240
           +ALDV++QAQI+ LL+ L+++  +  + I+HDL+VV   A RV VM  GQ VE G    +
Sbjct: 493 SALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVETGSHRDI 552

Query: 241 FDIPAHPYSEALLKAIP 257
           +D P HPY+ +L+ A+P
Sbjct: 553 WDRPQHPYTRSLIAAVP 569