Pairwise Alignments

Query, 322 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 342 a.a., Dipeptide ABC transporter, ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  366 bits (939), Expect = e-106
 Identities = 187/320 (58%), Positives = 243/320 (75%), Gaps = 1/320 (0%)

Query: 1   MSLLEIKNLNVRFGDKTAV-PVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGLIEHP 59
           M LL+IK+L+V F  +  V   VDG+ +++++GEVL IVGESGSGKSVTMMALMGL+  P
Sbjct: 1   MPLLDIKDLHVEFPTQGGVLHAVDGVSLTLEEGEVLGIVGESGSGKSVTMMALMGLVGFP 60

Query: 60  GIVTADALNFDGKDMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVLRLHL 119
           G V A+ + F GK++L +S++ RR +VGK++AM+FQ+P T+LNP +T+GFQ+ E LRLHL
Sbjct: 61  GRVRAEHMRFAGKELLGISDKARRSLVGKEVAMIFQEPTTSLNPCFTIGFQLMETLRLHL 120

Query: 120 KMSGKQARKRAIELLEKVEIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEP 179
           K+  ++A++RA ELLE+V IP A+SR+ +YPHQLSGGM+QRV IAMAIA  P+LLIADEP
Sbjct: 121 KLDKREAKRRATELLEQVGIPAASSRLGSYPHQLSGGMNQRVMIAMAIACNPRLLIADEP 180

Query: 180 TTALDVTIQAQIMELLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVEVGQVPQ 239
           TTALDVTIQAQI++LL  LQKE+ M LVLITH++ VV+E AQR+ VMYAGQ +E  +V  
Sbjct: 181 TTALDVTIQAQILDLLRDLQKERGMALVLITHNMGVVSEMAQRIAVMYAGQVMEHQRVDH 240

Query: 240 LFDIPAHPYSEALLKAIPEHSLGATRLATLPGIVPGRYDRPQGCLLSPRCPYVQENCRTQ 299
           LF  P HPY+EALL A+PE      RLAT+ G+VPG +DRP GCL +PRC YV E     
Sbjct: 241 LFASPQHPYTEALLAALPERVAPEGRLATISGMVPGVHDRPAGCLFAPRCSYVTERACHV 300

Query: 300 RPDLDPKTNSLARCFYPLNQ 319
           RP L     +  RC +PL +
Sbjct: 301 RPALREWQGAEVRCHFPLGE 320