Pairwise Alignments

Query, 323 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 345 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  323 bits (828), Expect = 4e-93
 Identities = 172/325 (52%), Positives = 222/325 (68%), Gaps = 9/325 (2%)

Query: 4   VLTARDLTRHYEVSRGLF------KGHATVRALNGVSFELEAGKTLAVVGESGCGKSTLA 57
           ++ A DL R ++VS          K    + A++GVSF +E GKTLA+VGESGCGKST+A
Sbjct: 19  LVVAHDLARTFDVSPPWLNRVLERKPRVLLHAVDGVSFSIERGKTLALVGESGCGKSTVA 78

Query: 58  RALTLIEEPSSGSLKIAGQEVAGADK-AQRKQLRKDVQMVFQSPYASLNPRQKVGDQLAE 116
           R L  +  P+ G L+  GQ+   A K ++ ++LR+ +QM+FQ PYASLNPR  V D + E
Sbjct: 79  RLLVGLYAPTRGGLQFDGQDAHAAFKTSEGRKLRRRIQMIFQDPYASLNPRWIVEDIIGE 138

Query: 117 PLLINTNLS-AAERREKVQAMMKQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVL 175
           PL  +  +S  A  RE+V  ++K VGL P    +YPH FSGGQRQRI++ARA+  QP+ L
Sbjct: 139 PLREHGIISDKAALRERVGELLKSVGLSPLDMSKYPHQFSGGQRQRISIARALATQPEFL 198

Query: 176 VADEPTSALDVSIQAQVLNLFMDLQQEFNTAYVFISHNLAVVQHVADDVMVMYLGRPVEV 235
           V DEPTSALDVS+QAQVLN+  DLQ+E    Y+FISHNLAVV+HVAD V VMYLGR VEV
Sbjct: 199 VCDEPTSALDVSVQAQVLNIMKDLQREQGLTYLFISHNLAVVRHVADQVGVMYLGRLVEV 258

Query: 236 GPKEDIYARPLHPYTQALLSATPTIHPDPNKPKIKIVGELPNPLNPPPGCAFHKRCPYAT 295
             K+ ++A P HPYT+ LL A P +     + +  + GE+PNPLNPP GCAFH RCP+A 
Sbjct: 259 ADKQKLFAAPQHPYTRMLLDAIPQM-KHTGRSRTPVQGEVPNPLNPPTGCAFHPRCPHAN 317

Query: 296 ARCSTEEPQLRPLDNRQVACHYAEQ 320
           ARCS E P+L  +   QVACH  E+
Sbjct: 318 ARCSAERPKLLGIAGVQVACHAVEE 342