Pairwise Alignments

Query, 323 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 688 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  276 bits (707), Expect = 8e-79
 Identities = 145/302 (48%), Positives = 193/302 (63%), Gaps = 4/302 (1%)

Query: 17  SRGLFKGHATVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIEEPSSGSLKIAGQ 76
           S GL K      A++ V   +  G+ + +VGESGCGKSTL R    +  P+ G + + G+
Sbjct: 384 SVGLSKPPVVTHAVDVVDLSVRPGEVVGLVGESGCGKSTLGRIAAGLLTPTEGEVIVGGK 443

Query: 77  EVAGADKAQRKQLRKDVQMVFQSPYASLNPRQKVGDQLAEPLLINTNLSAAERREKVQAM 136
            VA     ++   R  +QMVFQ PYASLNPR +V   + E  +++    AA + + V A 
Sbjct: 444 PVASLSAQEQLAARLRIQMVFQDPYASLNPRLRVSRIVGEAAMLHGLTDAAGQDDYVCAQ 503

Query: 137 MKQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTSALDVSIQAQVLNLF 196
           +++ GL P    RYPH FSGGQRQRI +ARA+ +QP +LV DE  +ALDVSIQAQ+LNLF
Sbjct: 504 LERAGLDPALRHRYPHQFSGGQRQRIGIARALAVQPSMLVCDEAVAALDVSIQAQILNLF 563

Query: 197 MDLQQEFNTAYVFISHNLAVVQHVADDVMVMYLGRPVEVGPKEDIYARPLHPYTQALLSA 256
           MDL+ +   AY+FISH+L V++H+ D V+VMYLGR VE  P  D++ARP HPYTQALL+ 
Sbjct: 564 MDLRDQLGLAYLFISHDLGVIEHLCDRVVVMYLGRVVESAPVADLFARPAHPYTQALLAE 623

Query: 257 TPTIHPDPNKPKIKIV-GELPNPLNPPPGCAFHKRCPYATARCSTEEPQLRPLDNRQ-VA 314
            P+I  D        + GE+P+P+ PP GC FH RCP A  RC TE P+LR +  R   A
Sbjct: 624 IPSI--DARGTTFSAIRGEIPSPIAPPSGCHFHPRCPQAMPRCRTEVPRLRGIAIRHATA 681

Query: 315 CH 316
           CH
Sbjct: 682 CH 683



 Score =  200 bits (509), Expect = 7e-56
 Identities = 118/327 (36%), Positives = 186/327 (56%), Gaps = 18/327 (5%)

Query: 5   LTARDLTRHYEVSRGLFKGHATVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTLIE 64
           L  R+L   +    G+         ++GVSF L  GK L +VGESG GKS    ++  + 
Sbjct: 14  LEVRNLQTRFHTRAGVLP------VVDGVSFTLGRGKVLGLVGESGSGKSVTGFSIMGLV 67

Query: 65  EP----SSGSLKIAGQEVAGADKAQRKQLRKD-VQMVFQSPYASLNPRQKVGDQLAEPLL 119
           +P      G +   G+E+      +R++LR + + M+FQ P A+LNP  +V  Q+ E + 
Sbjct: 68  DPPGKVEGGQVLFQGRELTQLPAIERRELRGNRIAMIFQDPMATLNPVLRVDTQMIEAVK 127

Query: 120 INTNLSAAERREKVQAMMKQVGLRP--EHYQRYPHMFSGGQRQRIALARAMMLQPKVLVA 177
            +  +S  E R   +  +  +G+    E  + YPH  SGG RQR+A+A AM+  P +++A
Sbjct: 128 AHKRVSTEEARRHARDTLGLMGIPSPEERLRAYPHQLSGGMRQRVAIAIAMLHGPDLIIA 187

Query: 178 DEPTSALDVSIQAQVLNLFMDLQQEFNTAYVFISHNLAVVQHVADDVMVMYLGRPVEVGP 237
           DEPT+ALDV+IQAQ+L+    L +E  T+ ++ISH+L+VV  +AD++ VMY GR VE G 
Sbjct: 188 DEPTTALDVTIQAQILSEVQKLVRETGTSLIWISHDLSVVASLADEIAVMYAGRIVEHGT 247

Query: 238 KEDIYARPLHPYTQALLSATPTIHPDPNKPKIKIVGELPNPLNPPPGCAFHKRCPYATAR 297
             D+   P HPYT+ L+ + P+ +    + + +I G  P+ L  P GCAF  RCP+A A 
Sbjct: 248 VADVLDHPQHPYTRGLIDSLPSANERGARLR-QIQGMTPSLLKMPAGCAFAPRCPHADAA 306

Query: 298 CSTEEPQL-RPLDN---RQVACHYAEQ 320
           C  + P++ RP  +    +V C + ++
Sbjct: 307 CEQQRPEVSRPRHDAPWHEVRCFHPQR 333