Pairwise Alignments

Query, 323 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 616 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  271 bits (692), Expect = 4e-77
 Identities = 137/282 (48%), Positives = 197/282 (69%), Gaps = 6/282 (2%)

Query: 4   VLTARDLTRHYEVSRGLF-KGHATVRALNGVSFELEAGKTLAVVGESGCGKSTLARALTL 62
           +L+ +DLT  +++  GLF +    V A+  VSF+L  G+TL++VGESGCGKST  R++T 
Sbjct: 314 ILSVKDLTTRFDIRSGLFGRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTGRSITR 373

Query: 63  IEEPSSGSLKIAGQEVAGADKAQRKQLRKDVQMVFQSPYASLNPRQKVGDQLAEPLLINT 122
           + EP+SG++ + G EV   D+   + +R+ VQMVFQ P+ASL+PR  VG  + EP + + 
Sbjct: 374 LIEPTSGNVTLDGYEVLKLDRTTLRTMRRSVQMVFQDPFASLDPRMSVGTAIMEPFMEHR 433

Query: 123 NLSAAERREKVQAMMKQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPTS 182
               A+ REK   ++++VGL P+  +R+PH FSGGQRQRIA+AR++ML PKV+VADE  S
Sbjct: 434 LGQKAQAREKAADLLEKVGLSPDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVADEAVS 493

Query: 183 ALDVSIQAQVLNLFMDLQQEFNTAYVFISHNLAVVQHVADDVMVMYLGRPVEVGPKEDIY 242
           ALDVSI+AQV NL +DLQQ  N A++FISH++AVV+ V+  V VMYLG  VE+GP+  ++
Sbjct: 494 ALDVSIKAQVCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVF 553

Query: 243 ARPLHPYTQALLSATPTIHPDPNKPKIK---IVGELPNPLNP 281
             P HPYT+ L+SA P   PDP + +I+      E+ +P+ P
Sbjct: 554 DNPQHPYTKKLMSAVPV--PDPARRQIRRNMATDEIKSPIRP 593



 Score =  185 bits (469), Expect = 3e-51
 Identities = 101/264 (38%), Positives = 166/264 (62%), Gaps = 13/264 (4%)

Query: 4   VLTARDLTRHYEVSRGLFKGHATVRALNGVSFELEAGKTLAVVGESGCGKS-TLARALTL 62
           VL+ ++LT  + V  G          +  +SF++   +T+A+VGESG GKS T    + L
Sbjct: 18  VLSVQNLTTSFRVDGGWKS------VVRNMSFDIAPRETVAIVGESGSGKSVTSLSIMRL 71

Query: 63  IEEPSS---GSLKIAGQEVAGADKAQRKQLR-KDVQMVFQSPYASLNPRQKVGDQLAEPL 118
           ++  +S   G + + G+++    + + +++R KD+ M+FQ P  SLNP   +G Q+AE L
Sbjct: 72  LDRKTSRIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQIAEAL 131

Query: 119 LINTNLSAAERREKVQAMMKQVGL--RPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLV 176
            ++ ++S++  + +V  ++++V +      +  YPH FSGG RQR+ +A A+  +PK+L+
Sbjct: 132 TVHQDISSSAAKAEVIRLLEKVRIPNAASRFGDYPHQFSGGMRQRVMIAMALASKPKLLI 191

Query: 177 ADEPTSALDVSIQAQVLNLFMDLQQEFNTAYVFISHNLAVVQHVADDVMVMYLGRPVEVG 236
           ADEPT+ALDV+IQ Q+L+L   LQ+E   + +FI+H++ VV  VAD  +VM+ G  VE G
Sbjct: 192 ADEPTTALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDVVETG 251

Query: 237 PKEDIYARPLHPYTQALLSATPTI 260
             +DI+ R  HPYT+ALLSA P +
Sbjct: 252 TTDDIFHRGQHPYTRALLSAVPKL 275