Pairwise Alignments

Query, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

 Score =  136 bits (342), Expect = 4e-37
 Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 14/199 (7%)

Query: 45  HLILVLVSMLAALVVGIPAGILLSR-PNMVGRAERFMQIFNIGNTVPPLAVLAIALGVL- 102
           H+ LV ++++ A+++G+P GIL++R P + G  +    +     TVP +A+  + L    
Sbjct: 22  HITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASATVLL---TVPSIALFGLLLPFYS 78

Query: 103 ----GIGSGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLFRVELPN 158
               G+G  PAI A+FL SLLPI+RNTY  L  V+  ++EAA GIGMT  Q L  VELP 
Sbjct: 79  KFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRLRMVELPI 138

Query: 159 AVPIIIGGVRVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALL 218
           AVP+I+ GVR A+ +N+G   +A  IGA  LG LI   I+ ++   L++GA   +LLA+ 
Sbjct: 139 AVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVLVSLLAIF 198

Query: 219 LDGLVTMASRLWLERGLRP 237
            D L+      WL+R L P
Sbjct: 199 ADLLLQ-----WLQRSLTP 212