Pairwise Alignments

Query, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

 Score =  136 bits (342), Expect = 9e-37
 Identities = 90/210 (42%), Positives = 127/210 (60%), Gaps = 4/210 (1%)

Query: 30  TIELYRDDLLFYLQAHLILVLVSMLAALVVGIPAGILLSRPNMVGRAERFMQIFNIGNTV 89
           T +L+  DL    + HL LV +S+  A+++G+P  IL+  P++  RA   +   ++  TV
Sbjct: 300 TAKLFGPDLWKLARQHLFLVALSVGIAILIGVPIAILVF-PHVRLRAV-VLGFASLLQTV 357

Query: 90  PPLAVLAIALGVLG-IGSGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPR 148
           P LA+LA+ + +LG IG+ PA+ AL L SLLPI+RNT  GL  V   L+ A   +GMTP 
Sbjct: 358 PSLALLAVLISMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPP 417

Query: 149 QVLFRVELPNAVPIIIGGVRVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLG 208
           Q L  V LP A+P ++ GVR A AI +GTA +A  IGA   G  I  G+ALN++  LL G
Sbjct: 418 QSLRLVLLPLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALNDRELLLAG 477

Query: 209 AACTALLALLLDGLVTMASRLWLERGLRPS 238
           A   A LAL+ +G+  +   L + RG R S
Sbjct: 478 ALPAAALALVSEGVFELIEFL-MRRGRRVS 506