Pairwise Alignments

Query, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 290 a.a., Glycine betaine/choline transport system permease protein OusW from Azospirillum sp. SherDot2

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 2/189 (1%)

Query: 46  LILVLVSMLAALVVGIPAGILLSRPNMVGRAERFMQIFNIGNTVPPLAVLAIALGVLGIG 105
           L LV+ S + AL+V IPAG+L      V R+     + ++  T+PP   L   + +LG G
Sbjct: 99  LALVISSTILALLVAIPAGVLTGFAPKVDRS--LEPVLDLVQTLPPYIYLLPGIALLGYG 156

Query: 106 SGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLFRVELPNAVPIIIG 165
              A+ A F+ ++ P  R T  G++       E     GMT  Q+  ++ LP AVP I+ 
Sbjct: 157 PATALAATFVVAVPPAFRLTALGIRLTPNEFLELGQSTGMTNWQMFAKIRLPFAVPSIMA 216

Query: 166 GVRVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLDGLVTM 225
           G+  +L +  G   +A ++G+  LG  I+  +   +  + + GA    +L ++LD L   
Sbjct: 217 GINQSLMMAFGMVVIAGIVGSGGLGETIYKAVRTLDIAKSIDGAIAIVILTIVLDRLTQG 276

Query: 226 ASRLWLERG 234
           A+RL  + G
Sbjct: 277 AARLGSQPG 285