Pairwise Alignments

Query, 298 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 313 a.a., putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  434 bits (1115), Expect = e-126
 Identities = 213/298 (71%), Positives = 254/298 (85%), Gaps = 1/298 (0%)

Query: 2   KRLTLILSCVLLFAGIAQAAEKPVIRIGARVFTEQTLLAEITSQYLRTKGYDARVTGGLG 61
           KR+ L+L   LLFAG AQAAEKP+IRIGARVFTEQT+LAEIT+QYLR  G+D RV GGLG
Sbjct: 13  KRIALLLGAALLFAGFAQAAEKPLIRIGARVFTEQTVLAEITAQYLRANGFDVRVIGGLG 72

Query: 62  SNLARSAQESGQLDLIWEYTGVSLVAYNHVDEKLDS-EQSYARVKELDAKKGLIWLSPSR 120
           S+LAR AQE+GQLDL+WEYTGVSLV+YNH+DE++ S E +YA+VKELDAKK LIWL+PS+
Sbjct: 73  SSLARQAQETGQLDLMWEYTGVSLVSYNHIDERMPSAEATYAKVKELDAKKDLIWLTPSK 132

Query: 121 FSNTYALALPENVAKEFPQINSISDLTHALAEKTKGTRLVALDTEFANRSDGMGGMVKLY 180
           FSNTYAL LP+ VA+ +PQINSISDL   L ++ K   LVALDTEFANR DG+ G+ ++Y
Sbjct: 133 FSNTYALGLPKQVAEAYPQINSISDLNQVLRDERKRNHLVALDTEFANRPDGLVGLKEMY 192

Query: 181 DMNLTRKNTRQMDAGLVYTALRNGQVFAGLVYTTDGRLNAFKLKLLEDDKHYFPDYTAAP 240
           D+ + R N RQMDAGLVYTA+ N QVFAGLVYTTDGRL+AF LKLLEDDKHYFPDYTAAP
Sbjct: 193 DLQVGRANIRQMDAGLVYTAMHNNQVFAGLVYTTDGRLSAFNLKLLEDDKHYFPDYTAAP 252

Query: 241 VIRQAYLDQHPTLAAELKPLADLFDDETMRQLNARVDVDHESPSAVAADFLRQHPINQ 298
           V+R+A LD +P L A LKPLA+  DDETMRQLNA+VDVDH++P+AVAA FLR+HP+ +
Sbjct: 253 VVRKAVLDANPQLVALLKPLAEQLDDETMRQLNAKVDVDHQNPTAVAAAFLREHPLKE 310