Pairwise Alignments

Query, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

Subject, 493 a.a., ABC transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  175 bits (444), Expect = 1e-48
 Identities = 93/204 (45%), Positives = 135/204 (66%), Gaps = 5/204 (2%)

Query: 12  WAQVLQLTGQHITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASATVLLTVPSIALFG 71
           W Q+LQ + +H+ LV I++ LA+L+ +PLGIL  R   L   L     +L TVPS+A+F 
Sbjct: 289 WTQLLQRSVEHLRLVAISLGLAMLLAIPLGILAARRRRLGQWLIGLTGILQTVPSLAMFV 348

Query: 72  LLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRL 131
            ++P       G+G  PAI A+FLYSLLPI+RNT+  L G+ P +RE+A  +G+  G RL
Sbjct: 349 FMIPLL-----GIGTWPAIAALFLYSLLPIVRNTHAGLIGIAPELRESAAALGLPPGVRL 403

Query: 132 RMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVL 191
           R VELP+A+  ILAG++TA V+N+G  T+AA IGAGG G  IL  I   D+ +++ GA+ 
Sbjct: 404 RWVELPLAMRSILAGIKTAAVINVGTATLAALIGAGGYGQPILTGIRLDDVGLILQGAIP 463

Query: 192 VSLLAIFADLLLQWLQRSLTPKGL 215
            ++LA+    L + ++R LTP+GL
Sbjct: 464 AAVLALLVQGLFELVERRLTPRGL 487