Pairwise Alignments

Query, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

Subject, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 92.8 bits (229), Expect = 6e-24
 Identities = 54/184 (29%), Positives = 103/184 (55%), Gaps = 5/184 (2%)

Query: 17  QLTGQHITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASATVLLTVPSIALFGLLLPF 76
           Q T + +  V  A ++ ++IGVPLGI+    P     ++    ++ TVP+   F  L+P 
Sbjct: 89  QETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTMMRPVLDLMQTVPT---FVYLIPT 145

Query: 77  YSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRLRMVEL 136
            + FG  LG +P + +  ++++   +R TYL +  V   + +A +  G +  Q L  +EL
Sbjct: 146 LTLFG--LGVVPGLISTVVFAIAAPIRLTYLGIRDVPQELMDAGKAFGCSRRQLLSRIEL 203

Query: 137 PIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVLVSLLA 196
           P A+P I AG+   +++++ ++ IAA +GA GLG  ++ +++ +D+++     + + LLA
Sbjct: 204 PHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPVVNALNTADIALGFEAGLAIVLLA 263

Query: 197 IFAD 200
           I  D
Sbjct: 264 IMLD 267