Pairwise Alignments

Query, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

Subject, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

 Score =  144 bits (363), Expect = 3e-39
 Identities = 82/191 (42%), Positives = 121/191 (63%), Gaps = 4/191 (2%)

Query: 17  QLTGQHITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASATVLLTVPSIALFGLLLPF 76
           +L  QH+ LV ++V +AILIGVP+ IL+     L   +   A++L TVPS+AL  +L+  
Sbjct: 310 KLARQHLFLVALSVGIAILIGVPIAILVFPHVRLRAVVLGFASLLQTVPSLALLAVLISM 369

Query: 77  YSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRLRMVEL 136
                  +G +PA+ A+ LYSLLPIMRNT   L  V  G+R A   +GMT  Q LR+V L
Sbjct: 370 LG----AIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPPQSLRLVLL 425

Query: 137 PIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVLVSLLA 196
           P+A+P +LAGVRTA  + IG  TIAA IGAGG G  I+  ++ +D  +L+ GA+  + LA
Sbjct: 426 PLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALNDRELLLAGALPAAALA 485

Query: 197 IFADLLLQWLQ 207
           + ++ + + ++
Sbjct: 486 LVSEGVFELIE 496