Pairwise Alignments

Query, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

Subject, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

 Score =  114 bits (285), Expect = 2e-30
 Identities = 70/198 (35%), Positives = 115/198 (58%), Gaps = 9/198 (4%)

Query: 12  WAQVLQLTGQHITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASATVLLTVPSIALFG 71
           W ++LQ     + LV ++  L +L+GVPLGIL+   P     L     V+ T+P+   F 
Sbjct: 92  WDKLLQT----LALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLPA---FV 144

Query: 72  LLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRL 131
            L+P    FG  LG +PA+ A  +Y+L P++R T L L+ ++P + +AA G+G +  QRL
Sbjct: 145 YLIPVLMLFG--LGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRL 202

Query: 132 RMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVL 191
           R + LP+A+P I+AG+  +V+M + ++ +A+ IGA GLG  +LA I   ++   +   + 
Sbjct: 203 RRIALPLALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVLAGIQTLNVGQGMEAGLA 262

Query: 192 VSLLAIFADLLLQWLQRS 209
           +  LA+  D + Q   RS
Sbjct: 263 IVALAMVIDRISQAYGRS 280