Pairwise Alignments

Query, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

Subject, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

 Score = 99.0 bits (245), Expect = 8e-26
 Identities = 62/202 (30%), Positives = 110/202 (54%), Gaps = 10/202 (4%)

Query: 4   LNAFSHLDWAQVLQL-----TGQHITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASA 58
           L AF  L +  +L L     T + +  V  A ++ ++IGVPLGIL    P     ++   
Sbjct: 71  LTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVL 130

Query: 59  TVLLTVPSIALFGLLLPFYSKFGQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIRE 118
            ++ TVP+   F  L+P  + FG  LG +P + +  ++++   +R TYL +  V   + +
Sbjct: 131 DLMQTVPT---FVYLIPTLTLFG--LGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMD 185

Query: 119 AARGIGMTFGQRLRMVELPIAVPVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASIS 178
           A +  G +  Q L  +ELP A+P I AGV   +++++ ++ IAA +GA GLG  ++ +++
Sbjct: 186 AGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALN 245

Query: 179 RSDMSMLIVGAVLVSLLAIFAD 200
            +D+S+     + + LLAI  D
Sbjct: 246 TADISLGFEAGLAIVLLAIMLD 267