Pairwise Alignments

Query, 387 a.a., ornithine decarboxylase from Pseudomonas simiae WCS417

Subject, 400 a.a., type III PLP-dependent enzyme from Magnetospirillum magneticum AMB-1

 Score = 94.4 bits (233), Expect = 5e-24
 Identities = 110/344 (31%), Positives = 155/344 (45%), Gaps = 31/344 (9%)

Query: 51  KVYYAVKANPAVEIIDLLKEKG-SSFDIASIYELDKVMDRGVSADRISYGNTIKKSKDIR 109
           +V YAVK NP   ++  L   G   FD ASI E+ +++ R      I + + +K    IR
Sbjct: 58  QVLYAVKCNPDEAVLRALAAGGIGHFDAASIAEV-RLVRRLFPEAGIHFMHPVKARSAIR 116

Query: 110 YFYE-KGVRLFSTDSEADLRNIAKAAPGS---KVYVRI-LTEGSTTADWPLSRKFGCQTD 164
             Y   GVR F  D   +L  I     G+   ++ VR+ L +G    D  LS KFG   D
Sbjct: 117 EAYGLHGVRDFVLDGAGELDKIVAETEGASDLRLIVRLGLAKGDARLD--LSGKFGASAD 174

Query: 165 MAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIHLKLINM 224
            A+ LL     +G V  G+SFHVGSQ  D S W+ A+A+   +         I L ++++
Sbjct: 175 DAVRLLRRCAAVGRV--GLSFHVGSQCCDPSAWERALAQADAVIRAA----AIQLDVLDV 228

Query: 225 GGGFPANYI-TRTNSLETYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLV 283
           GGGFP  Y   R   L  +   I R +          +  EPGR+L+A    LV +V   
Sbjct: 229 GGGFPVAYPGMRPPPLAAFMAAIRRGVARMGLPSGCVLWCEPGRALVAGCQSLVVQV--Q 286

Query: 284 ARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEK-KGEMEEVVIA----GPTCDSA 338
           AR+        ++ + G +  L +    A ++P    K  G   E + A    GPTCDS 
Sbjct: 287 ARRG-----DMLFINDGVYGTLSDAGALAWRYPCRLIKAAGASHETLQAFGFFGPTCDSL 341

Query: 339 DIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFPPL 382
           D M   +   LP + A GD +     GAY        FNGF  L
Sbjct: 342 DRMPGPFL--LPADTAEGDWIEIGQLGAYGACL-RTGFNGFNDL 382