Pairwise Alignments

Query, 250 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 272 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 50/157 (31%), Positives = 65/157 (41%), Gaps = 11/157 (7%)

Query: 68  RIAAQSGHLMARNMAGRCQEHGWGCAVDEVAAAREYRMAAKAGLDWGQYNYANLLATGRG 127
           R  A  G + A N  G    +G     D V A    RMAA  G     +N       G+G
Sbjct: 71  RRQALQGSVSALNDLGWIWLNGKYWRADTVLAGHLLRMAALQGNAAAWFNLGQQHYFGKG 130

Query: 128 VAEDQQQALAFYRQAAEQGHAKSMNLVGRYLEEGLFCPRDLDAAVD------WYRRSAEA 181
           +     QA   YRQA ++G   +   +G   EE + C  DL+  VD      W+ R AE 
Sbjct: 131 IDPSYVQAAECYRQAFDRGMLHAAAALGDLYEEEV-CDGDLEWQVDLVQAYQWFLRGAEQ 189

Query: 182 GDFRGQFSYAAVLADSGQIE----AALAWLRKALAGG 214
           G+ R +F     L     +E    AAL WL  A A G
Sbjct: 190 GEARCRFEMGYRLMHGLHVEANLKAALYWLELAAAAG 226



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 43/158 (27%), Positives = 58/158 (36%), Gaps = 31/158 (19%)

Query: 25  VRAAQAILIAAKEGVVDAQALLGQILLEGRGIARDEALALRWFRIAAQSGHLMARNMAGR 84
           V A   + +AA +G   A   LGQ    G+GI      A   +R A   G L A    G 
Sbjct: 100 VLAGHLLRMAALQGNAAAWFNLGQQHYFGKGIDPSYVQAAECYRQAFDRGMLHAAAALGD 159

Query: 85  CQEHGWGCAVDEVAAAREYRMAAKAGLDWGQYNYANLLATGRGVAEDQQQALAFYRQAAE 144
             E       +EV             L+W                 D  QA  ++ + AE
Sbjct: 160 LYE-------EEV---------CDGDLEW---------------QVDLVQAYQWFLRGAE 188

Query: 145 QGHAKSMNLVGRYLEEGLFCPRDLDAAVDWYRRSAEAG 182
           QG A+    +G  L  GL    +L AA+ W   +A AG
Sbjct: 189 QGEARCRFEMGYRLMHGLHVEANLKAALYWLELAAAAG 226



 Score = 29.3 bits (64), Expect = 9e-05
 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 5/97 (5%)

Query: 20  LDDSPVRAAQAILIAAKEGVVDAQALLGQILLE-----GRGIARDEALALRWFRIAAQSG 74
           +D S V+AA+    A   G++ A A LG +  E           D   A +WF   A+ G
Sbjct: 131 IDPSYVQAAECYRQAFDRGMLHAAAALGDLYEEEVCDGDLEWQVDLVQAYQWFLRGAEQG 190

Query: 75  HLMARNMAGRCQEHGWGCAVDEVAAAREYRMAAKAGL 111
               R   G    HG     +  AA     +AA AG+
Sbjct: 191 EARCRFEMGYRLMHGLHVEANLKAALYWLELAAAAGV 227