Pairwise Alignments

Query, 761 a.a., ligand-gated channel protein from Pseudomonas simiae WCS417

Subject, 698 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  213 bits (541), Expect = 4e-59
 Identities = 195/732 (26%), Positives = 327/732 (44%), Gaps = 73/732 (9%)

Query: 44  QRNSISLGATSITGEEQDNTSYQVE------KASSQKYTAPLVDTPRSVTVVPQQVLKDT 97
           + N++ L   S+T +  ++ S  V+       AS+ K    + D P+S++V+P  VLKD 
Sbjct: 24  EENTLELDTISVTTDAYESASSPVKGYRATRSASATKTDTAIGDIPQSISVIPATVLKDL 83

Query: 98  AATSLQDALRTVPGITFGAGEGGNPQGDRPFIRGFDAQGDTYLDGVRDTGG--QSREIFD 155
            +T+++ AL    G++     GG    +   +RGF    + Y DG     G   + +  +
Sbjct: 84  GSTNVERALEFAGGVSKQNNFGGLTLYEYS-VRGFTTS-EFYQDGFSANRGYPSTPDAAN 141

Query: 156 IESIEVSKGPNSSFGGRGSAGGSLNLVSKTPQARDFTNGGFTYGSDQTRRYVLDVNRQFL 215
           IE IEV KGP +S  GRG  GG++N+V+K PQ   FT    + GS    R  +DVN    
Sbjct: 142 IERIEVLKGPAASLYGRGDPGGTVNIVTKKPQPEAFTTLQTSAGSWDRYRTAVDVNTPLD 201

Query: 216 DDSAAFRLNLMSHEQNVAGRDAVNYDRWGVAPSLTFGLGTPTRVNLSYYHMESDDLPDSG 275
            +        ++ E N + RD V   R  VAPS ++ L   T + +    +      D G
Sbjct: 202 SEGKVLTRVNLAVEDNHSFRDHVQSKRVFVAPSFSWQLDPDTSLLVESEFVRHSSTFDRG 261

Query: 276 IPYGYGSSTATAHVHDKPNDGGDSNNFYGLKDRDFRKTRADISTFSIEHDLND--NMTLK 333
           I      S +T     +PNDG   N+   L+              ++EH LND   + L 
Sbjct: 262 IVDAPSLSRST--FLGEPNDGDIDNHNNRLQ-------------ATLEHHLNDAWKLRLA 306

Query: 334 NTLRHGSTGQDYILTQPDDSKFNVNRFGTVWRRANSRVSTTTTTTNQTDLFGSFQALGFK 393
           +  + GS   D      ++   N +   T+ RR   R +    +  Q +L G F    ++
Sbjct: 307 SHYKQGSLWGD----ASENRALNPDGH-TINRRYRERSTGWHDSITQLELRGLFDIGSWQ 361

Query: 394 HSYSTGLEFTGEETRVSNYTISPNTNPVCTVAKGSLGGQCTSLSNPNPDDAWTGSIARNY 453
           H    G E+  E+ R      +             + GQ      P P+   +G+   ++
Sbjct: 362 HELLVGTEY--EDYRKKERVTAIGGRDYAIDIYNPVYGQ------PKPNGTRSGT---DF 410

Query: 454 YGTATKATSRGAYVFDTIELDPKWLLNVGLRYDTFDTVANTDSATGRSKIKEDSQFFNWQ 513
           +    +  S    + D I    +    VG R++ F+   + D     +K K+    F  +
Sbjct: 411 F---EQTKSHALNLQDQIIFTDRLRGMVGARFEHFEQSID-DFTRNHAKSKQTHDAFTQR 466

Query: 514 AGLVWKPVENASIYASYATSATPAGGLVGEGSDGNPLSAGAASSDLQPEETVNYELGTKW 573
           AGL+++      ++A+ +TS  P  GL             A +   +PEE V YE+G K 
Sbjct: 467 AGLLYQLTPQVGVFANASTSFKPNSGL------------DANNKSFKPEEGVGYEVGIKS 514

Query: 574 DLFHDRLSLTAAVFRTEKKNTRILVDALTYQNA-GESQVDGVELSASGKITDQWQVFAGY 632
           +LF DRLS T A F  EK+N   L  A     A G+++  G++L  SG+++D  +V   +
Sbjct: 515 ELFDDRLSATLAAFHIEKENVLTLDPATNLNRAVGKARSQGLDLQVSGQVSDAIRVIGAF 574

Query: 633 SYLDSELVKSGLNGRNGVVSSGSNKGNQMPNTPKNTFSLWTTYDVTSKL----TIGGGAF 688
           +Y+D+E+ K      +  + +GS    ++    K + SL   Y+          +G    
Sbjct: 575 AYIDAEVTKG-----DKTIPAGS----RILGVAKRSGSLLGVYEFQDGALRGSDLGAAIT 625

Query: 689 YVDQVYGDAGNTVYVPSYTRYDAMASYKLTKNVDLQLNVQNLTDKLYYDKAFSTHFANQA 748
           YV    G+AG    +P+Y   D +A YK T+NV + LN+ NL D+ YY++++S ++ N  
Sbjct: 626 YVGDRSGEAGTGFELPAYHTVDLLAHYKATENVTVGLNLNNLFDEKYYERSYSNYWINPG 685

Query: 749 AGRTALLTTSFH 760
             R   ++ + +
Sbjct: 686 EPRNLTVSLTLN 697