Pairwise Alignments

Query, 761 a.a., ligand-gated channel protein from Pseudomonas simiae WCS417

Subject, 812 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  182 bits (462), Expect = 6e-50
 Identities = 182/708 (25%), Positives = 294/708 (41%), Gaps = 71/708 (10%)

Query: 74  KYTAPLVDTPRSVTVVPQQVLKDTAATSLQDALRTVPGI---TFGAGEGGNPQGDRPFIR 130
           K + PL +TPRSV+VV  Q +KD  + +L + L  VPGI    F AG+G    GD  FIR
Sbjct: 156 KTSTPLSETPRSVSVVTGQRIKDQKSQTLTEVLGYVPGIFAPPFAAGDG--LAGDLFFIR 213

Query: 131 GFDAQGDTY---LDGVRDTGGQ---SREIFDIESIEVSKGPNSSFGGRGSAGGSLNLVSK 184
           GF+A    Y    DG+R  G +   + E + +E +E+ +GP+S   G  + GG +NLVSK
Sbjct: 214 GFNATDYGYGLLRDGLRVQGNRYDTTSEPYGLERVEIFRGPSSLLYGENAPGGLVNLVSK 273

Query: 185 TPQARDFTNGGFTYGSDQTRRYVLDVNRQFLDDSAAFRLNLMSHEQNVAGRDAVNYDRWG 244
            P A         YGS+  R+  +D++    D        +M   ++    D V  DR  
Sbjct: 274 HPTATPQGEVQLGYGSNNRRQLGVDISGPLNDSDNILGRVVMLGRKSDTQTDHVPDDRLY 333

Query: 245 VAPSLTFGLGTPTRVNLSYYHMESDDLPDSGIPYGYGSSTATAHVHDKPNDGGDSNNFYG 304
           +APSLT        + L   + +     + G+P       A   +   PN     +   G
Sbjct: 334 IAPSLTLNFDDYNTLTLLANYQKDHTNLELGLP-------AAGTLLTNPNGKLSKHTMLG 386

Query: 305 LKDRDFRKTRADISTFSIEHDLNDNMTLKNTLRHGSTGQDYILTQPDDSKFNVNRFGT-V 363
             D +  +  A  + +   H  ND+   +   R+  +  +   T P  S  N   FGT +
Sbjct: 387 DPDWNTFEREAWSTGYEFSHSFNDDWQFRQNSRYMQSRINRHETWP--STLNNRGFGTQL 444

Query: 364 WRRANSRVSTTTTTTNQTDLFGSFQALGFKHSYSTGLEFTGEETRVSNYTISPNTNPVCT 423
              A  R + +   +    L G FQ  G +++   G  +  + T  +    +     +  
Sbjct: 445 NMTAYDRYNKSMVYSLDNQLEGKFQVGGLENTVLFGASY--DRTSFNQDWDAGFAGTINV 502

Query: 424 VAKGSLGGQCTSLSNPNPDDAWTGSIARNYYGTATKATSRGAYVFDTIELDPKWLLNVGL 483
                L    T ++  N               T  +   +G Y     + D  WL  +G 
Sbjct: 503 YNPVYLRDPLTPVAVQN---------------TLLEQQMKGVYAQVQSKYD-HWLFLLGG 546

Query: 484 RYDTFDTVANTDSATGRSKIKEDSQFFNWQAGLVWKPVENASIYASYATSATPAGGLVGE 543
           R D  D+    D     S  + + + F +Q G++++     + Y SY+T+  P   +   
Sbjct: 547 RQDWVDSDFR-DKVNKASNTRSEDRKFTYQGGVMYQFDNGLTPYVSYSTAFVPVQQISNA 605

Query: 544 GSDGNPLSAGAASSDLQPEETVNYELGTKWDLFHDRLSLTAAVFRTEKKNTRILVDALT- 602
           G            S L+P  +  YE+G K++      ++T +V+   K++   L DA T 
Sbjct: 606 G------------SPLKPITSSQYEVGVKYEPIGWDTAMTLSVYDLRKEDDTYL-DATTN 652

Query: 603 -YQNAGESQVDGVELSASGKITDQWQVFAGYSYLDSELVKSGLNGRNGVVSSGSNKGNQM 661
            Y+  GES+  G E+  +  IT    V A Y+Y D+ + K          ++   +G QM
Sbjct: 653 SYRQVGESRAKGAEVEVNSNITPNLNVTAAYTYTDARITKDS--------ATSLVEGRQM 704

Query: 662 PNTPKNTFSLWTTY----DVTSKLTIGGGAFYVDQVYGDAGNTVY----VPSYTRYDAMA 713
              P+N  S+W  Y         L++GGG  Y D  +     T+Y      S T  DA  
Sbjct: 705 TGVPRNQASVWGKYRFLDGQLKGLSLGGGVRYFDSTFSYTAPTLYGKLDAGSVTLVDAAV 764

Query: 714 SYKLTKNVDLQLNVQNLTDKLYYDKAFSTHFANQAAGRTALLTTSFHF 761
            Y++ K+  + +N +NL DK Y               RT L T S+++
Sbjct: 765 GYQIDKHWSVDVNAKNLFDKEYVSGCNDAGRCYWGDSRTLLGTVSYNW 812