Pairwise Alignments

Query, 761 a.a., ligand-gated channel protein from Pseudomonas simiae WCS417

Subject, 710 a.a., putative TonB-dependent receptor from Pseudomonas putida KT2440

 Score =  320 bits (821), Expect = 1e-91
 Identities = 248/737 (33%), Positives = 361/737 (48%), Gaps = 59/737 (8%)

Query: 35  AAEDTEQKGQRNSISLGATSITGEEQDNTSYQVEKASSQKYTAPLVDTPRSVTVVPQQVL 94
           A     Q   ++S++L AT++T   +  +    E  S+ K  APL D P++V VVP+ V+
Sbjct: 21  AVHAAAQTDTQSSLALPATAVTSVYEQQSYKASESRSAMKIDAPLRDIPQTVNVVPESVI 80

Query: 95  KDTAATSLQDALRTVPGITFGAGEGGNPQGDRPFIRGFDAQGDTYLDGVRDTGGQSREIF 154
           KD  A S++D L+ VPGI    G+G   Q D+  IRGF A GD Y+DGVRD     R++ 
Sbjct: 81  KDQGAQSMEDVLKNVPGIGLSNGDG---QRDQVTIRGFSAIGDMYIDGVRDDALYFRDLS 137

Query: 155 DIESIEVSKGPNSSFGGRGSAGGSLNLVSKTPQARDFTNGGFTYGSDQTRRYVLDVNRQF 214
           +IE +EV KGP +   GRGS+GG +N +SK P        G    S+  RR   D     
Sbjct: 138 NIERVEVIKGPAAVLYGRGSSGGLINSISKKPSFTPKREVGMNVDSEGKRRTQFDTGWAD 197

Query: 215 LDDSAAFRLNLMSHEQNVAGRDAVNYDRWGVAPSLTFGLGTPTRVNLSYYHMESDDLPDS 274
              + A+R+   + E +   RD    DR  +APS  F L     +NL   ++    L D 
Sbjct: 198 PQSNQAYRVT-GAFEDSDTFRDDGYIDRKAIAPSAYFRLSDDLELNLGATYLYDKRLIDF 256

Query: 275 GIPYGYGSSTATAHVHDKPNDGGDSNNFYGLKDRDFRKTRADISTFSIEHDLNDNMTLKN 334
           GIP   G+        DK    GD+       D+D+ ++     T S+++ +NDN TL N
Sbjct: 257 GIP-ALGNRPVDVD-RDKRFGSGDA-------DQDYARSEVFSLTASLDYRINDNFTLTN 307

Query: 335 TLRHGSTGQDYILTQPDDS--KFNVNRFGTVWRRAN--SRVSTTTTTTNQTDLFGSFQAL 390
           T R+     D   T  D S  +F     G +  + N  +         NQT+L    Q  
Sbjct: 308 TSRYYRYDLDRNNTLADSSPTRFVTAPDGELLIKLNRGNVARDEYGVFNQTELKQQAQLA 367

Query: 391 GFKHSYSTGLE--FTGEETRVSNYTISPNTNPVCTVAKGSLGGQCTSLSNPNPDDAWTGS 448
           G +H+   G+E  F  +  RV + T      PV   A   +     +LS+          
Sbjct: 368 GMQHNLLYGVEAGFQDKYQRVLSQTNVAQV-PVYRDALVPVPEHAANLSSK--------- 417

Query: 449 IARNYYGTATKATSRGAYVFDTIELDPKWLLNVGLRYDTFDTVANTDSATGRSKIKEDSQ 508
                 GT  + T+ G YV D IEL+  W   VG+RYD F    + D        + D +
Sbjct: 418 ------GTNFQQTT-GLYVQDMIELNAHWKALVGVRYDIFGQEYDDDRVQNIDLDRTD-K 469

Query: 509 FFNWQAGLVWKPVENASIYASYATSATPAGGLVGEGSDGNPLSAGAASSDLQPEETVNYE 568
            ++ +AGLV++P    S Y S + S  P+G +          +   ++  L+PEET NYE
Sbjct: 470 TWSPRAGLVYQPDAIQSYYVSVSRSYQPSGEV---------FAVSPSNQHLEPEETTNYE 520

Query: 569 LGTKWDLFHDRLSLTAAVFRTEKKNTRILVDA---LTYQNAGESQVDGVELSASGKITDQ 625
           +G KWDL   RLSLTAAVFR E+ N +    A   LT   AGE + DG E + SG +TD+
Sbjct: 521 IGAKWDLLDSRLSLTAAVFRLERTNMKTADPANPNLTVL-AGEQRTDGFEATVSGHLTDK 579

Query: 626 WQVFAGYSYLDSELVKSGLNGRNGVVSSGSNKGNQMPNTPKNTFSLWTTYDVTSKLTIGG 685
           WQ++AGY+YLD+E+ KS  +  NGV    +N+G     TP+N+ ++W    +T +  +  
Sbjct: 580 WQIYAGYAYLDAEITKSN-SKTNGV----ANEGQTPTLTPRNSANVWLVRTLTPEWRVAA 634

Query: 686 GAFYVDQVYGDAGNTVYVPSYTRYDAMASYKLTKNVDLQLNVQNLTDKLYYDKAF-STHF 744
           GA YVD+ Y    N V +P YT +DA   Y + +  D  L ++N+ D+ YY  A  S   
Sbjct: 635 GANYVDERYTALDNVVVMPGYTTFDAALLYSVPQ-WDAALRLKNVFDRDYYASAHGSVDL 693

Query: 745 ANQAAGRTALLTTSFHF 761
               A RT  L  SF++
Sbjct: 694 ITPGAPRT--LEASFNY 708