Pairwise Alignments

Query, 761 a.a., ligand-gated channel protein from Pseudomonas simiae WCS417

Subject, 761 a.a., putative TonB-dependent receptor BfrD from Acinetobacter radioresistens SK82

 Score =  662 bits (1707), Expect = 0.0
 Identities = 356/776 (45%), Positives = 495/776 (63%), Gaps = 51/776 (6%)

Query: 14  RMLASAIGVALSASAIAHQAQAAEDTEQKGQRNSISLGATSITGEEQDNTSYQVEKASSQ 73
           ++++SAI  +LS  A    AQ     +Q  Q  +I   AT+      +  S +V+++++ 
Sbjct: 9   KIVSSAIVSSLSVMAGHAVAQ-----DQVAQLETIHSQATT------EQQSLKVDQSANS 57

Query: 74  KYTAPLVDTPRSVTVVPQQVLKDTAATSLQDALRTVPGITFGAGEGGNPQGDRPFIRGFD 133
           K+ APL+DTP+SV+++  Q+++DT  T+L DALRTVPGIT GAGEGGNP GDRPFIRG++
Sbjct: 58  KFVAPLLDTPKSVSIISNQLIEDTKVTTLSDALRTVPGITLGAGEGGNPNGDRPFIRGYN 117

Query: 134 AQGDTYLDGVRDTGGQSREIFDIESIEVSKGPNSSFGGRGSAGGSLNLVSKTPQARDFTN 193
           ++   Y+DGVR+   Q+RE+F +E +EV+KG  S+ GG G+ GGS+NL+SK  +  DF  
Sbjct: 118 SESSMYVDGVRNATSQNREMFAVEQVEVTKGSASAMGGAGTVGGSINLISKVAKKGDFLE 177

Query: 194 GGFTYGSDQTRRYVLDVNRQFLDDSAAFRLNLMSHEQNVAGR-DAVNYDRWGVAPSLTFG 252
           G    G+D  +R  LD N+ F +  AA R+ +M H    AG+ D   Y R G+APS+TFG
Sbjct: 178 GSVENGTDNYQRITLDGNKDFGNGIAA-RVAIMGHHNEKAGQSDGAEYKRAGIAPSITFG 236

Query: 253 LGTPTRVNLSYYHMESDDLPDSGIPYGYGSSTATAHVHDKPNDGGDSNNFYGLKDRDFRK 312
           L T TR  LSYY++++DD PDSG+P  Y + T  +    KP D      +YG KDRDF+K
Sbjct: 237 LDTSTRATLSYYYLKTDDTPDSGVP--YNNPTGYSQYSGKPID-VKQGIYYGWKDRDFQK 293

Query: 313 TRADISTFSIEHDLNDNMTLKNTLRHGSTGQDYILTQPDDSKFNVNRFGTVWRRANSRVS 372
               + T  +EHDL DN+T+ NT  +  +  DY+ T PDDS+ N+ + G VW R NSR++
Sbjct: 294 QENQVGTIKLEHDLADNLTISNTAVYSKSKNDYLWTNPDDSQGNIYKNGNVWARVNSRIA 353

Query: 373 TTTTTTNQTDLFGSFQALGFKHSYSTGLEFTGEETRVSNYTISPNTNP-----VCTVAKG 427
            T T T+Q  L G F     KHS++ G E++ +ET  + Y I+  +        CT A  
Sbjct: 354 NTDTFTDQLALTGKFNTGTLKHSFNLGAEYSDQETDRTQYIINGLSATGAEYNKCTPA-D 412

Query: 428 SLGGQCTSLSNPNPDDAWTGSIA---RNYYGTATKATSRGAYVFDTIELDPKWLLNVGLR 484
              G CTS+ NPN    WTGSI+    + Y T TK+TS   Y  D+IE +P+W+L++GLR
Sbjct: 413 IASGWCTSVQNPN-RGPWTGSISTEGADQYNTQTKSTS--IYFLDSIEFNPQWILDLGLR 469

Query: 485 YDTFDTV------ANTDSATGRS------------KIKEDSQFFNWQAGLVWKPVENASI 526
           +D FDT       A   +  G S            K + D+ FF +QAG+ +KPVEN SI
Sbjct: 470 WDKFDTEQTMTYGARNSAVLGSSTTPPTKQVGEQVKTESDTDFFTYQAGITFKPVENGSI 529

Query: 527 YASYATSATPAGGLVGEGSDGNPLSAGAASSDLQPEETVNYELGTKWDLFHDRLSLTAAV 586
           YASYATSA P G   G+GS+G     GAA S+L PEE+  +E+GTKWDL  +RL+LTAA+
Sbjct: 530 YASYATSANPVGVDAGDGSEG----IGAAYSNLDPEESQTFEIGTKWDLLENRLNLTAAI 585

Query: 587 FRTEKKNTRILVDALTYQNAGESQVDGVELSASGKITDQWQVFAGYSYLDSELVKSGLNG 646
           FRTEK+N RI +   TY N GES+VDG+EL  +GKITD+W + AGY+YLDSE  K+G++ 
Sbjct: 586 FRTEKQNARIQLSPTTYSNIGESKVDGIELGLNGKITDKWDISAGYTYLDSEATKNGVSC 645

Query: 647 RNGVVSSGS-NKGNQMPNTPKNTFSLWTTYDVTSKLTIGGGAFYVDQVYGDAGNTVYVPS 705
           R    +  +   GN+MPN PKN+ +LWT Y    +L +G GA  +D+VYGD  NT YVP 
Sbjct: 646 RGTTCTDQAVFNGNRMPNVPKNSATLWTNYQALPQLQLGAGATAMDKVYGDLANTKYVPG 705

Query: 706 YTRYDAMASYKLTKNVDLQLNVQNLTDKLYYDKAFSTHFANQAAGRTALLTTSFHF 761
           Y RYDAMA Y + KNVDLQLN+ NL+DK Y+ KA+++H+A +A GR A+L+ +F +
Sbjct: 706 YVRYDAMARYNVNKNVDLQLNLNNLSDKRYFTKAYASHYATEAEGRNAVLSLNFKY 761