Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 367 a.a., HTH-type transcriptional repressor CytR from Xanthobacter sp. DMC5

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 78/317 (24%), Positives = 147/317 (46%), Gaps = 9/317 (2%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           L  +A   GV  +T +  ++ + + +RIS   VE+V+A     G+ P+  A+ LR+  +R
Sbjct: 17  LQSVADAVGVHRSTVARALDPE-QSRRISADVVEKVQAEARRQGYRPDAVASSLRTGRSR 75

Query: 63  TLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDDADSERQLLQLFRARRCDALF 122
            +G ++PDL NP +A I   +     ARGY +++A S +D   +  +++   ARR D L 
Sbjct: 76  LIGVVVPDLANPVFAPILGGIGATLAARGYSMMVADSGEDEAGQADIVEKLIARRVDGLV 135

Query: 123 VASCLPASDDSYRELQAK-GLPVIAIDRVMGADQFCSVVSDDRQACLQLTSSLLQPLPKQ 181
           +A+     DD+   L  K G+P + ++R     +  +VVSDD        + L     ++
Sbjct: 136 LATA--KRDDATVSLCLKAGVPTVLVNRGEDGLRASTVVSDDTGGIAVAVAHLAGLGHRR 193

Query: 182 IVLIGARPELSISQERAAGFREAL--EGFTGEVIVEHGEAFSRDCGRQLMEQLLQQLGHL 239
           I  +     LS    R  GF +A+   G   + +     A++R+ GR    +LL +   +
Sbjct: 194 IGHLAGPERLSTGVLRRRGFADAMAAAGLPADAVTT-ATAYNREAGRVAAAELLDRWPDI 252

Query: 240 PDALVTTSYVLLQGVFDALHDFPLK-SRPLRLGTFGDTQLLDFLPLPVNAMAQQHQLIAE 298
             A+  ++ ++  G +       L+  + L +    D  L+D +  P+  +   H+ +  
Sbjct: 253 -TAIAASNDLIALGAYQEAQQRGLRIPQDLSIVGHNDMPLVDMVAPPLTTVRIGHEAMGA 311

Query: 299 TALRLALVAVEDEQYQP 315
            A  + L  +   +  P
Sbjct: 312 RAASILLDQIAQPETPP 328