Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 347 a.a., HTH-type transcriptional repressor CytR from Xanthobacter sp. DMC5

 Score =  108 bits (271), Expect = 1e-28
 Identities = 95/318 (29%), Positives = 153/318 (48%), Gaps = 14/318 (4%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           L+D+AR AGV ++TAS V+ G+A Q R+   T  R+  + E   +  NP A GLR++ T 
Sbjct: 19  LADVARAAGVDMSTASRVLRGEASQ-RVREETRVRILKIAEEMQYLANPLARGLRTQRTD 77

Query: 63  TLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDDADSERQLLQLFRARRCDALF 122
           TLG ++P L+NP +A   +  E  A  RGY LLI S  +  ++   + ++ R  R D L 
Sbjct: 78  TLGIVVPQLDNPVFASAIRGAELEAAERGYSLLI-SHREPGETATTIAKISRTNRVDGLL 136

Query: 123 VASCLPASDDSYRELQAKGLPVIAIDRVM-GADQFCSVVSDDRQACLQLTSSLLQPLPKQ 181
           VAS L   +    +L A  +P + ++R++ GA    SVV D R A  +    L     ++
Sbjct: 137 VAS-LDDDEVLRTDLAAARVPFVLMNRILPGAP--LSVVLDSRAAARKGVEHLTALGHRR 193

Query: 182 IVLIGARPELSISQERAAGFREALE--GFTGEVIVEHGEAFSRDCGRQLMEQLLQQLGHL 239
           I  +  R     ++ER  G+R+ LE  G   +  +     ++ + G Q M  LL Q    
Sbjct: 194 IAHLAGREGGFNARERLQGYRDGLEAAGIAFDEALVGVAGYTAEGGTQAMRALLPQ---H 250

Query: 240 PDALVTTSYVLLQGVFDALHDFPLKSRPLRLGTFG--DTQLLDFLPLPVNAMAQQHQLIA 297
           P A++  + V   G    LH+  L+  P  +   G  D  +   L   + ++A   + + 
Sbjct: 251 PTAVLAATLVSAAGAMATLHEAGLRI-PEDISVIGLHDAPVAGMLYPALTSVAMPTEEMG 309

Query: 298 ETALRLALVAVEDEQYQP 315
             A  L + A+  E   P
Sbjct: 310 RVAAGLLIRALGGEDPAP 327