Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 334 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 21/319 (6%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           +SDIA+  G++  T S  ++   +   +  AT+ R+  V     + PN  A GL+   + 
Sbjct: 9   ISDIAKRVGMTTITVSRALS---KPDLVKPATLARILEVAREMDYVPNAFARGLKRSESL 65

Query: 63  TLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDDADSERQLLQLFRARRCDALF 122
            +G I   ++NP Y+ + K + + A+  GY +++  +D+  + E + +      R   + 
Sbjct: 66  IIGVITASVDNPFYSEMIKAISREAKQHGYTIMLVDTDELEELESKAVDTLLGYRVAGII 125

Query: 123 VA--SCLPASDDSYRELQAKG-LPVIAIDRVMGADQFCSVVSDDRQACLQLTSSLLQPLP 179
           ++  S  P+    Y E  A G  PV+ +DR +    F  VV D+  + +Q    LL+  P
Sbjct: 126 LSPVSDEPSYQPDYLERLANGKTPVVLLDRTIHDSPFSRVVLDNYHSGIQAAHYLLRQTP 185

Query: 180 --KQIVLIGARPELSISQERAAGFREAL-EGFTGEVIVEHGEAFSRDCGRQLMEQLLQQL 236
             K+++++       I+ ER  G RE L E    EV V+ G+         LM   L  L
Sbjct: 186 NLKRLLVLTGPEHSRITVERLKGLREVLAEHPQVEVAVQAGD-------YTLMPSYLHTL 238

Query: 237 GHL-----PDALVTTSYVLLQGVFDALHDFPLKSRPLRLGTFGDTQLLDFLPLPVNAMAQ 291
            +L     PDA++  + ++  G   AL    +    L +         D   +P+  +A 
Sbjct: 239 DYLAEHSAPDAIMGFNQLITLGALRALRMHNIAHDSLTICGIDRLPFADIFGVPIACVAH 298

Query: 292 QHQLIAETALRLALVAVED 310
              L   +A+RL L  +ED
Sbjct: 299 DASLAGSSAVRLLLDRLED 317