Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  115 bits (289), Expect = 1e-30
 Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 14/312 (4%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           + D+A  A VSVTT S+V+N   + + +S    ERV   +   G+ PN  A  L+S  T 
Sbjct: 4   IKDVALQAEVSVTTVSHVVN---DTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60

Query: 63  TLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDDADSERQLLQLFRARRCDALF 122
           TLG ++P+  NP +A I +++E      GY L++ ++DD+   +   LQ+   RR D L 
Sbjct: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120

Query: 123 VASCLPASDDS-YRELQAKGLPVIAIDRVMGADQFCSVV-SDDRQACLQLTSSLLQPLPK 180
           V       DD+  ++L    +P + +DR + AD  C +V +   Q  L     LL    K
Sbjct: 121 VVLTGTGDDDALVKQLHGLRVPTVLVDREI-ADPACDLVETAHMQGGLLAVRHLLSLGHK 179

Query: 181 QIVLIGARPELSISQERAAGFREALEGFTGEVIVEHGEA------FSRDCGRQLMEQLLQ 234
           +I  IG +  +  S++R  G+R AL        + +G+A      F+   G + M  +L 
Sbjct: 180 RIACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAIL- 238

Query: 235 QLGHLPDALVTTSYVLLQGVFDALHDFPLK-SRPLRLGTFGDTQLLDFLPLPVNAMAQQH 293
           +    P A+   + ++  G   A H+  ++    L +  F D +L  +   P+  +AQ  
Sbjct: 239 RTERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPK 298

Query: 294 QLIAETALRLAL 305
           + I   A+ + L
Sbjct: 299 ERIGAMAVDMLL 310