Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 334 a.a., Fructose repressor FruR, LacI family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  248 bits (633), Expect = 2e-70
 Identities = 146/330 (44%), Positives = 203/330 (61%), Gaps = 5/330 (1%)

Query: 1   MKLSDIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRH 60
           +KL +IARLAGVS TTASYVINGKA+Q R+S+ TVE+V AVV  H + PN  AAGLR+  
Sbjct: 1   VKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR 60

Query: 61  TRTLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDDADSERQLLQLFRARRCDA 120
           TR++G ++PDLEN SY RIA  LE+ AR RGYQLLIA S+D  D+E + ++    R+ DA
Sbjct: 61  TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA 120

Query: 121 LFVASCLPASDDSYRELQAKGLPVIAIDRVMGADQFCSVVSDDRQACLQLTSSLLQPLPK 180
           + V++ LP     Y+       P++A+DR +  + F SVV  D+     L   L +   +
Sbjct: 121 IIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAE 180

Query: 181 QIVLIGARPELSISQERAAGFREALEGFTGEVIVEHGEAFSRDCGRQLMEQLLQQLGHLP 240
            ++ +GA PELS+S  R  GFR A +    EV   +  ++ R+   QL E+ L +   +P
Sbjct: 181 TVLYLGALPELSVSFLREQGFRTAWKDDPREVNFLYANSYEREAAAQLFEKWL-ETHPMP 239

Query: 241 DALVTTSYVLLQGVFDAL--HDFPLKSRPLRLGTFGDTQLLDFLPLPVNAMAQQHQLIAE 298
            AL TTS+ LLQGV D     D  L S  L + TFGD +LLDFL  PV A+AQ+H+ +AE
Sbjct: 240 QALFTTSFALLQGVMDVTLRRDGKLPS-DLAIATFGDHELLDFLQCPVLAVAQRHRDVAE 298

Query: 299 TALRLALVAV-EDEQYQPGVHAIGRTFKQR 327
             L + L ++ E  + +PG+  I R   +R
Sbjct: 299 RVLEIVLASLDEPRKPKPGLTRIRRNLYRR 328