Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 336 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 16/264 (6%)

Query: 5   DIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRHTRTL 64
           ++A+ AGVS  T S V++G      +S  T +RV   VE  G+ PN  A  L ++ T+TL
Sbjct: 6   EVAKRAGVSKATVSRVLSGNGY---VSQETKDRVFQAVEESGYRPNLLARNLSAKSTQTL 62

Query: 65  GFILPDLENPSYARI--AKLLEQGARA---RGYQLLIASSDDDADSERQLLQLFRARRCD 119
           G ++    N  Y  I  ++LL   AR    +G QLL+A     A+ ERQ +Q     RCD
Sbjct: 63  GLVVT---NTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCD 119

Query: 120 ALFVASCLPASDDSYRELQAKGLPVIAIDRVMGADQFCSVVSDDRQACLQLTSSLLQPLP 179
           A+ +     + D+    + A   P++ ++R +  +   SV  D +Q      + L+    
Sbjct: 120 AIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGH 179

Query: 180 KQIVLIGARPELSISQERAAGFREALEGF---TGEVIVEHGEAFSRDCGRQLMEQLLQQL 236
           ++I  +    +   S ER AG+++AL        E ++ +G+ ++   G + +E LL++ 
Sbjct: 180 QEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGK-WTPASGAEGVEMLLER- 237

Query: 237 GHLPDALVTTSYVLLQGVFDALHD 260
           G    ALV ++  +  G   ALH+
Sbjct: 238 GAKFSALVASNDDMAIGAMKALHE 261